Paraburkholderia bryophila: NDK50_14505
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Entry
NDK50_14505 CDS
T08797
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pbry
Paraburkholderia bryophila
Pathway
pbry03420
Nucleotide excision repair
pbry03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NDK50_14505
03430 Mismatch repair
NDK50_14505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbry03400
]
NDK50_14505
Enzymes [BR:
pbry01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NDK50_14505
DNA repair and recombination proteins [BR:
pbry03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NDK50_14505
MMR (mismatch excision repair)
Other MMR factors
NDK50_14505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
WCM18653
LinkDB
All DBs
Position
1:complement(3241377..3243731)
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AA seq
784 aa
AA seq
DB search
MPDLLANLNPEQHAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQHGLASPATVLAVTF
TNKAAREMMSRLQGLLPIDTRGMWIGTFHGLCNRMLRAHHRDAGLPATFQILDTADQLSA
IKRLMKGLNIDDEKYPAKNLQYFINNAKEQGLRPKNVDATDNFNLKFVELYEAYDQQCQR
EGVVDFPELLLRCFELLAHNPPLRAHYQARFRHILVDEFQDTNKLQYAWLKMLAGQTNSI
FAVGDDDQSIYAFRGANVGNMRDFEHEFNVRHLIKLEQNYRSHGHILDAANQLIANNSRR
LGKNLRTDAGHGEPVRVYESATDSQEAGWIVEEIKALISTGTSRSEVAILYRSNAQSRTI
EHTLVNAGIAYRVYGGLRFFERQEVKHALAYLRLIDNPNDDTAFVRVVNFPTRGIGARSI
EQLADAARLYNCSMAAAIPYVAGKAGSSLSAFANLVGRMRAETQQMSLPETVEYVVRTSG
LSEFYQNEREGQDRLENLQELVNAAAAFVSEEGYGMDTPARSIPLRPGASAAPELAVATD
DPNTVVLDAPGIADPAQNPDTMTPLAGFLSHASLEAGDNQAQAGQEAVQLMTVHAAKGLE
FTAVFITGLEEGLFPHENSAMESDGLEEERRLMYVAITRAKERLYLSFAQSRMLHGQTRY
NIRSRFFDELPQETLKWLTPKIEAGARWGGGRSDNAGYGRDWFARPGYTGPASSTPAPLP
AFANEQRAAETGFRVGQQVFHTKFGEGTITALEGGGVDAKAQVKFKRHGEKWLALAVAKL
QAVE
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatctgctcgccaacctgaaccccgaacaacacgccgccgtcacgctccccaac
gagccggcgctcatcctcgccggcgcgggcagcggcaagacccgcgtgctcatcacccgc
atcgcgtggctgatccagcatgggctggcgtcgccggccaccgtcctcgcggtgaccttc
accaacaaagccgcccgcgaaatgatgtcgcgtctccaggggctgttgccgatcgacacg
cgcggcatgtggatcggcaccttccacggcctctgcaaccgcatgctccgcgcgcaccat
cgcgacgcaggcctgcccgccacgttccagattctcgataccgccgaccagctgtccgcg
atcaagcgtctgatgaagggcctcaatatcgacgatgaaaagtacccggccaaaaacctc
cagtacttcatcaacaacgcgaaagaacaaggcctgcgcccgaaaaacgtcgacgcgacc
gacaacttcaatctgaaattcgtcgagctgtacgaagcctacgaccagcagtgccagcgc
gaaggcgtggtcgattttccggaactgctgctgcgctgcttcgaactgctcgcgcacaat
ccgccgctgcgtgcccactatcaggcgcgcttccggcatatcctggtcgacgagttccag
gacaccaacaagctgcagtacgcgtggctcaagatgctggccggccagaccaactcgatc
ttcgcggtcggcgacgacgaccagtccatctacgcgttccgtggtgcgaacgtcggcaac
atgcgcgacttcgaacacgagttcaacgtccgtcatctgatcaagctggagcagaactac
cgctcgcacggccatattctcgacgccgccaatcaactgatcgccaacaattcacgccgt
ctgggcaaaaatctgcgcaccgacgcgggtcacggcgaaccggtgcgcgtgtacgaatcc
gccaccgattcgcaggaagccggctggatcgtcgaggaaatcaaggcgctgatcagcacc
ggcacgtcgcgcagcgaagtcgcgatcctgtatcgcagcaacgcgcagtcgcgcacgatc
gaacacacgctggtcaacgcgggcatcgcgtatcgcgtgtatggcggcttgcgctttttc
gagcgccaggaagtcaagcacgcgctcgcctatctgcgcctgatcgacaatccgaacgac
gacactgcgttcgtgcgcgtcgtcaatttcccgacgcgcggcatcggcgcacgctcgatc
gaacaactcgcggacgcggcacgtctctacaactgctcgatggctgcggcgattccgtac
gtagcgggcaaggccgggtcgagtctctccgctttcgcgaacctggtcggcagaatgcgc
gcggaaacgcagcagatgagcctgccggaaaccgtcgagtacgtggtgcgcacgagcggg
ctgtccgagttctatcagaacgaacgcgagggccaggaccggctggagaacttgcaggaa
ctggtcaacgcggcggcggcgttcgtcagcgaagaaggctacggcatggacacgccggcg
cgttccattccgctgcgcccgggcgcgagtgccgcgccggagctggcggtcgccaccgac
gacccgaataccgtcgtgctcgacgctcccggcatcgccgacccggcgcaaaacccggac
acgatgacaccgcttgccggcttcctgtcgcacgcctcgctcgaagcgggcgacaaccag
gcgcaagccggccaggaagccgtgcaactcatgaccgtccacgcggccaagggcctggag
ttcaccgcggtgttcatcacgggtctcgaagagggcctgttcccgcatgagaacagcgcg
atggagtcggacggtctggaagaagagcggcgcctcatgtacgtggcgatcacgcgcgca
aaggagcggttgtatctgtcgttcgcgcaaagccgcatgctgcacggccagacgcgttac
aacatccgctcgcgcttcttcgacgaactgccgcaggaaaccctcaagtggctcacgccg
aagatcgaggcgggcgcgcgctggggaggcggccggtcggacaacgccggttatgggcgc
gactggttcgcgcggccgggttataccgggcccgcgtcgtccacgccggcgccgttgccg
gctttcgcgaatgaacagcgggcggcggaaacgggcttccgggtggggcagcaggtgttc
cacaccaagttcggcgaaggcacgatcaccgcgctcgaaggcggcggcgtcgacgccaag
gcacaggtcaaattcaagcggcacggcgagaagtggctggcgctcgcggtcgccaaattg
caggcggtcgaatga
DBGET
integrated database retrieval system
