Paraburkholderia bryophila: NDK50_15905
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Entry
NDK50_15905 CDS
T08797
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pbry
Paraburkholderia bryophila
Pathway
pbry03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
NDK50_15905 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbry03019
]
NDK50_15905 (orn)
03009 Ribosome biogenesis [BR:
pbry03009
]
NDK50_15905 (orn)
Messenger RNA biogenesis [BR:
pbry03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NDK50_15905 (orn)
Ribosome biogenesis [BR:
pbry03009
]
Eukaryotic type
Pre-60S particles
RNases
NDK50_15905 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
WCM18902
LinkDB
All DBs
Position
1:complement(3548038..3548646)
Genome browser
AA seq
202 aa
AA seq
DB search
MTDILASTDQPLVRSDMNLVWLDMEMTGLEPDSDRIIEIAVVVTNSTLDRLVEGPVLAIH
QSDETLAKMDQWNQNTHGRSGLIDRVKASTVSEADATEQIREFLGAYVPPGKSPMCGNSI
CQDRRFMARWMPDLERFFHYRNLDVSTLKELCRRWQPAIYKGFQKRAMHTALADIHESID
ELKYYREHFLIPASADAAGTAE
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgactgacatcctcgcatccaccgaccagccgctcgtacgtagcgacatgaatctcgtc
tggctggacatggaaatgaccggactcgagcccgattccgatcgcatcatcgaaatcgcg
gtcgtggtgacgaattcgacgctcgaccgcctggtcgaaggtccggtgctggcgattcat
cagagcgacgagacgctcgccaaaatggatcagtggaatcagaacacgcacggccgctcg
gggttgatcgaccgcgtgaaggcttccacggtcagcgaagccgacgccaccgaacagatt
cgcgagttcctgggtgcttacgtgccgccgggcaaatcgccgatgtgcggcaactcgatc
tgccaggatcgccgcttcatggcgcgctggatgccggatctggagcgcttcttccattac
cgcaacctcgacgtcagcacgctgaaggaattgtgccgccgctggcagccggctatctac
aaaggtttccagaagcgcgccatgcatacggcgctggccgatattcacgaatcgatcgac
gagctgaagtactaccgcgagcacttcctgattccggcctcggcggatgcggcgggcacc
gcggaataa
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