Paraburkholderia bryophila: NDK50_16445
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Entry
NDK50_16445 CDS
T08797
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pbry
Paraburkholderia bryophila
Pathway
pbry03030
DNA replication
pbry03430
Mismatch repair
pbry03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NDK50_16445
03430 Mismatch repair
NDK50_16445
03440 Homologous recombination
NDK50_16445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbry03032
]
NDK50_16445
03400 DNA repair and recombination proteins [BR:
pbry03400
]
NDK50_16445
Enzymes [BR:
pbry01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NDK50_16445
DNA replication proteins [BR:
pbry03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NDK50_16445
DNA repair and recombination proteins [BR:
pbry03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NDK50_16445
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Cho_C
GIY-YIG_UvrC
GIY-YIG
Rv2179c-like
ATP-synt_DE_N
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
WCM19004
LinkDB
All DBs
Position
1:complement(3669228..3670379)
Genome browser
AA seq
383 aa
AA seq
DB search
MSEQFLSEPALNEPIVFVDLETTGGSTSEHRITEVGVVEIGPAGVSRWSSLVDPQQPIPS
FIQQLTGITNAMVRGAPTFDAIAPALFERLNGKLFVAHNASFDRGFLRGEFRRVGLAFDP
DVLCTVRLSRALFPAEKRHGLDALVERHALVPSDRHRALADADLIWQFWQRLHGLVPLDV
LRAQIERTTRRYRLAGNITEDLLDSAPAGCGVYAFYGEEDLPLYVGRSVRVRQRLRSHLT
GEKRSSKDIRLAQQVRRVEWRATGGELGAMLAEAQWIATLRPGHNRVPRVTKSDPADAPW
PFQGPIVFEEREGGAQARAFHVVDRWRYVGHAPSLAQAADLHASSVAGPFELSTYRILQS
HLARGLRVMPLSVTSGVSAPSLA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacagtttttgtcggaaccggccctgaatgagccgatcgttttcgtcgacctt
gaaaccaccggcggctcgaccagcgagcatcgcattaccgaagtcggtgtggtcgaaatc
gggcccgccggcgtgtcgcgctggagcagtctggtcgacccccagcagccgattccgtcc
ttcatccagcaacttaccggtatcaccaacgcgatggtgcgcggcgcgccgaccttcgac
gcgatcgcgccggcgctgttcgagcgcctgaacggcaaactgttcgtcgctcataacgcg
agtttcgatcgcggctttctgcgcggcgagtttcgccgcgtcggcctcgcgttcgatccg
gacgtgttgtgcacggtgcgtctgtcacgcgcgttgtttccggcggaaaagcgccatggg
ctggacgcgttggtcgagcgtcatgcgctggtgccgtccgaccgtcaccgcgcgctcgcc
gatgccgatctgatctggcagttctggcagcgcctgcacggcctcgtgccgctagacgta
ttgcgcgcccagatcgagcgcaccacgcggcgttaccggctcgccggcaacatcaccgaa
gatctgctggacagcgcgccggccggatgcggcgtctacgcgttttatggggaagaggat
ctgccgctgtacgtcgggcggagcgtgcgagtgcgtcagcgcttgcgttcgcacctgacc
ggcgaaaagcgatcgtcgaaggatattcggctcgcgcagcaggtgcgacgcgtcgagtgg
cgagcgaccggtggcgaactcggcgccatgctggcggaagcgcagtggatcgcgaccttg
cgtcccggtcacaaccgcgtgccgcgcgtgacgaaaagcgatccggcggacgcgccctgg
ccgtttcaaggcccgatcgttttcgaggagcgcgagggaggggcgcaggcgcgcgcgttt
catgtggtcgatcgctggcgctatgtgggccatgcgccctcgctcgcgcaggcggcggat
ctgcacgcatcgagcgtcgcggggccgttcgaattgtcgacctaccgcattttgcaaagt
cacctcgcgcgcggtttgcgggtgatgccgttgagcgtgacgagcggcgtgtccgccccg
agtctcgcttaa
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integrated database retrieval system
