Paraburkholderia bryophila: NDK50_16870
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Entry
NDK50_16870 CDS
T08797
Name
(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
pbry
Paraburkholderia bryophila
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pbry03009
]
NDK50_16870
Enzymes [BR:
pbry01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
NDK50_16870
Ribosome biogenesis [BR:
pbry03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
NDK50_16870
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltransf_31
Ubie_methyltran
Methyltransf_25
MTS
Methyltr_RsmF_N
Methyltransf_24
Methyltransf_15
Fibrillarin
Cons_hypoth95
GCD14
FtsJ
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-ProteinID:
WCM19077
LinkDB
All DBs
Position
1:complement(3750885..3752144)
Genome browser
AA seq
419 aa
AA seq
DB search
MRLHGFLIGQTETLLAEVLKLTGPADATTSRFFRAHPKLGHGERGVIAEAVFAVLRRRME
FAHLAESGAGSPARRMALLGLMQTAGRNALKPFVTEQELSWLEHVSKIDPESLPLRIRLN
LPDWIYQALAKRFEAAELAQLAVALNYPAPLDLRANPIKASREDVLNALSKAGIEAGETP
FAPFGVRVVGKPPLTKLDAFQHGWVEVQDEGSQLLCSLVAPKRGEMIVDFCAGAGGKTLA
LGAAMRSTGRLYAFDISERRLAKLKPRLARSGLSNVNPVLIDSEHDAKIKRLAGKIDRVL
VDAPCSGLGTLRRNPDLKWRQSPESVAELAPKQLSILASASRLVKKGGRLVYATCSILEA
ENEAVVQQFLADHPDFALVPARDVLAEQRIELEMGDYLSLWPHRHATDGFFAAVLERQS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgagattacatggttttttgattggacaaactgagactttgctggctgaagtcttgaaa
ctcaccggcccagccgatgccaccaccagccgctttttccgcgcccatccgaagctcggg
cacggcgagcgcggcgtgatcgcggaagcggtgttcgcggtgctgcgtcgccggatggaa
ttcgcccatctggcggaaagcggcgccggcagcccggctcgccgcatggctttgctcggc
ctgatgcagacggcggggcgcaacgcgctcaagccgttcgtgacggaacaggaattgagc
tggctcgaacacgtgtcgaagatcgacccggaaagcctgccgttgcggattcgcctgaat
ctgcccgactggatctatcaggcactggccaagcgtttcgaggctgccgaactggcccaa
ctggccgtcgcgctgaactatccggcgccgctggacctgcgcgcgaacccgatcaaggcg
agccgcgaagacgtgctgaacgcgctgtcgaaggcgggcatcgaggccggcgaaacgccg
ttcgcgccgttcggcgtgcgggtggtcggcaaaccgccgctcaccaagctcgacgcgttc
cagcacggctgggtcgaagtgcaggacgaaggcagccagttgctgtgttcgctggtcgcg
cccaagcgcggcgagatgatcgtcgacttctgcgcgggcgcgggcggcaagacgctggcg
ctgggcgcggcaatgcgctccaccggccgtctgtacgcgttcgacatctccgagcggcgc
ctcgccaagctcaagccgcgcctcgcgcgcagcgggctgtcgaacgtgaatccggtgctg
atcgacagcgaacacgacgccaagatcaagcgtctggccggcaagatcgaccgcgtgctg
gtcgacgcgccgtgcagcgggctgggcacgctgcgccgtaatcctgacttgaagtggcgc
cagtcgccggaatcggtggccgagttggcgccgaagcagttgtcgattctggcgagcgct
tcgcgtctggtgaagaagggcggccgcctcgtctacgcgacctgctcgattctcgaagcg
gaaaacgaagcggtcgtgcagcagttcctcgccgaccatccggacttcgcgctggtgccc
gcgcgcgacgtgctggccgagcagcgtatcgagctggaaatgggcgactacctgtcgctg
tggccgcaccgccacgcaaccgacggcttcttcgccgccgtgctggaacgccagagctaa
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