Paraburkholderia bryophila: NDK50_17080
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Entry
NDK50_17080 CDS
T08797
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
pbry
Paraburkholderia bryophila
Pathway
pbry00541
Biosynthesis of various nucleotide sugars
pbry01100
Metabolic pathways
pbry01250
Biosynthesis of nucleotide sugars
Module
pbry_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NDK50_17080 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pbry01005
]
NDK50_17080 (kdsB)
Enzymes [BR:
pbry01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
NDK50_17080 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
pbry01005
]
Lipid A
NDK50_17080 (kdsB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
DSBA
Nif11
Motif
Other DBs
NCBI-ProteinID:
WCM19119
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Position
1:3803306..3804106
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AA seq
266 aa
AA seq
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MTQTNVTTPPFIAVVPARLASTRLPNKPLADIGGKPMVVRVAERARESGAQQVLIASDAQ
AVLDAAREHGFEAVLTRADHPSGTDRLAEVAAQFGWSDETIVVNVQGDEPLIDPALVCGV
ASHLAASHGCAIATAAHPITEAAEIFNPNVVKVVLDARGVALYFSRAPIPWSRDAYQPHW
PDVASMPTPPAPAVVYRHIGLYAYRVQFLRTYPTLAISPIEQVEALEQLRAMWHGERIAV
RVTDNAPLPGVDTPADLARVQALFGS
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgactcaaaccaacgtcaccactcccccgttcatcgccgtcgtgccggcccggctcgct
tcgacgcgtctgcccaacaagccgctggccgacatcggcggtaagccgatggtggtgcgg
gtcgccgaacgcgctcgcgaatcgggcgcccagcaggtgctgatcgcgtccgacgcgcaa
gcggtgctcgacgcggcccgcgaacacggtttcgaggccgtgctcacgcgcgccgatcat
ccgtcgggcacggaccgtctggcggaagtcgccgcgcagttcggctggagcgacgagacg
atcgtggtcaacgtgcagggcgacgaaccgctgatcgacccggcgctggtgtgcggcgtt
gcgtcgcaccttgcggcgagccacggctgcgcgatcgccactgcggcccatccgatcacc
gaggccgccgagatcttcaacccgaacgtcgtcaaggtcgtgctcgacgcacgcggcgtg
gcgctgtacttctcgcgcgcgccgattccctggtcgcgcgacgcctaccagccgcattgg
ccggacgtcgcgtcgatgcccacgccgccggcccccgcagtcgtctaccggcatatcggg
ctgtatgcgtatcgcgtgcaattcctgcgcacctaccccacgctcgcgatctcgccgatc
gagcaggtcgaagcgctcgaacaattgcgcgcgatgtggcatggcgagcgcattgcggtg
cgcgtcaccgacaacgcgccgctgcccggcgtcgacacaccggcggatctcgcacgcgtg
caggctttattcgggtcttga
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