KEGG   Paraburkholderia bryophila: NDK50_18445
Entry
NDK50_18445       CDS       T08797                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
pbry  Paraburkholderia bryophila
Pathway
pbry03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pbry00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    NDK50_18445 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pbry02044]
    NDK50_18445 (tssM)
Secretion system [BR:pbry02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   NDK50_18445 (tssM)
SSDB
Motif
Pfam: IcmF-related IcmF-related_N IcmF_C IcmF_helical
Other DBs
NCBI-ProteinID: WCM19379
LinkDB
Position
1:4101491..4105210
AA seq 1239 aa
MKFVTRVVQLMVSRTWWLCVWLCVEIALVVALIWSAGPLLAIGATRPLESATVRAWLIAL
VLLAGCMRLVWRMRGGASGSDAGAGAGAGAGAGAGASLFERWREHWTSASNPKTTDNPRA
VTGTDDRAKVAELRARFHSTLSLLRRANPAAGKLAAWLDAVTGRYVYRLPWYLVVGSDGS
GKTAVLVHGGLDLSTVEQAAQAAAGHIEATVQCAWWFSNHAVLIDTPGHYLEAADDTQRR
SAEWRALLALLRKHRPRQPLNGVLLTVAIDTLLALNQAERAAYAARLRKSLQSMRESLGM
QVPIYLCLTRMDRLGGFVEYFSALSREGREQVWGATFPLDETAAPSNRAATAFTDAFDKL
AQRLTEGLRDVLSTDPDLDSRALAYLFPQQFASLRDVLDGFCSALFRASQLEPNLVARGI
YFTSALQSGPAIDRVLAPVRQHLHSAMPSPSPAPATNRVSQSYFLKQLLHEAVFADAGLA
GTSRASLRRRLIAHTTLAVASVALLLILLTGWAISYSNNRAYLDEVGAHVTAFNRHAREP
ITLAAGALAPLAPLLDSVRSLPRSERFEIDAPPELRYGLGLYPGAKIGEASEMVYRRALD
DKLLPQAAARLETLLSNAPPDDPEYTYDALKAYLMLHDATHYDGGFVAAWLILDTQMTWP
SGTTLDQRARLEAHLTRLFETRAVASPFALDAALVSRVRERLARDSFAQRAYHQLRRELL
RTPRAAPLTIVSAGGPQAALVFRRISGKPLSDGIDSLYTYRGYWDVFDKRVAGAVAQLRR
EEPWVLGIDAAPTVDTARLALEVRRAYFNDYIEVWDAYLNDLTLADSKSIAQSTRIARTL
SAPDSPLKQFLQAAARETNLSRAASPTEQRPTADRLQQRLGEARRSLAAMFGNAAPAAPQ
AADEDRPEAMVDAHFEPLRRLVTSSDGGAAGTAPFDGNLHVVDELYSYLTSASAALNSGN
SPPPTDVFDKLQADAGRMPMPLRKMFGDLSQNGSAQVGGALRANLAQDAQGGVGRLCRHM
IAGRYPFARNSSRDVALDDFSKLFAPGALMDSFFQKNLASQIDVSGSRWRFRRDATGSAP
GDARLAGSFQNADIIRTAFFSGSATMPALQVELTPLELDPGIAQYTLDVDGQTIRYAHGP
QFPTTVKWPSPNGSGGGGGGGGQVSLQISTPGGTDGLQTQGPWALHRLLDKARIAPGATP
ETFVATFDFNGRKLSLRVIANSSYNPFRLPQMDAFSGPS
NT seq 3720 nt   +upstreamnt  +downstreamnt
atgaagttcgtaacacgggtagtgcagcttatggtgtcccgaacctggtggctgtgtgtc
tggctatgcgtcgagatcgcactggtcgtcgcgttgatctggagcgcggggccgctgctg
gcgatcggcgcgacgcgtccactggagagtgcgacggtgcgggcgtggctgattgcgctc
gtgctgctggccgggtgcatgcggctcgtctggcgcatgcgcggtggtgcgagcggtagc
gatgcgggtgcgggtgcgggtgcgggtgcgggtgcgggtgcgggtgcgagcctgttcgag
cgttggcgtgaacactggacgagcgcgagcaacccgaagacaacggataacccccgcgca
gttaccggcaccgacgaccgtgccaaggttgccgaactccgtgcccgttttcacagcacg
ctctctctcctgcgtcgcgcaaacccggcggcaggcaagctcgcggcatggctcgatgcc
gtcaccggccggtacgtgtatcgattgccgtggtatctcgtggtcggcagcgacggctcg
ggcaagactgctgtacttgttcacggcggactcgatctgtcgacggtcgagcaggcggcg
caagctgccgccggccacatcgaagcgaccgtgcaatgcgcctggtggttcagcaaccac
gcggtgctcatcgatacgcccggccactatctggaagccgccgacgacacccagcggcgc
agcgccgagtggcgcgccttgctcgcgctgcttcgcaaacaccggccgcgccaaccgctg
aacggcgtgctactgacggtcgcgatcgacacgctgctcgcgctgaaccaggctgaacgt
gcggcctacgcggcgcgtctgcgcaagtcgctgcaatcgatgcgggagtcgctcggcatg
caggtcccgatctacttatgtttaacccgcatggatcgccttggcggcttcgtcgagtac
ttttccgcgctgagccgcgaaggccgcgagcaggtttggggcgcgaccttcccgctcgac
gaaactgccgcgccgtccaaccgcgccgccacggcattcaccgacgcattcgacaagctc
gcgcagcgcctgaccgaaggcttgcgcgacgtgctgagcaccgatcccgatctcgatagc
cgagcgctcgcctatctgttcccgcagcagttcgcgagtctgcgcgatgtgctcgacggt
ttctgctccgcgctgtttcgggcgtcgcaactggaacccaatctggtcgcgcgcggcatc
tacttcaccagcgccttgcagagcgggccggcaatcgaccgggtactggcgcccgtcaga
caacacttgcacagcgcaatgccgtcgccttcgcctgcgcccgcaacaaatcgagtcagc
caaagctactttctcaagcaactgctgcacgaagcggtttttgcggatgctggcctcgcc
ggcacgagccgtgcgtcgctgcggcgacgtctgatcgcgcacacgacgctcgcagtggca
agcgtcgccctgctgctgatactgctaaccggctgggcgatcagctattccaacaaccgt
gcctatctcgacgaagtcggcgcgcacgtcaccgcgttcaatcggcacgcacgcgagccg
atcacgttagccgccggtgcgttggcgccgctcgcgccgctgctcgacagcgtgcgaagt
ctgccccgcagcgaacgcttcgagatcgacgcaccgccggaattgcgctacggactcggt
ctttaccccggcgcgaaaatcggtgaagccagcgaaatggtctatcgccgcgcgctcgac
gacaagctgctgccgcaggccgccgcgcgtctcgaaacgctgctgtccaacgccccgccc
gacgaccccgaatatacgtacgacgcgctcaaggcctatctgatgcttcacgacgccacc
cactacgacggcggttttgtcgccgcgtggctgatcctcgacacgcagatgacctggccg
tccggcaccacgctcgatcaacgcgcacgcctggaagcgcaccttacgcggctcttcgaa
acgcgcgcggtcgcctcgccgtttgcgctcgatgcagcgctggtgagccgcgtgcgtgag
cggctcgcgcgcgattcgtttgctcagcgcgcctaccatcagttgcgccgagaactgctg
cgtacgccgcgcgccgcgccgctcactatcgtcagcgcgggcggcccgcaagcggcgctc
gtgttccggcgcatcagcggcaagccgctcagcgacggcatcgacagtctgtatacgtac
cgaggctattgggacgttttcgacaaacgtgtcgccggcgccgtcgcgcaactgcgccgc
gaagaaccctgggtgctgggtatcgacgccgcgcccaccgtcgacaccgcgcgcctggcg
cttgaagtgcggcgtgcgtacttcaacgactacatcgaagtctgggacgcctatctcaac
gacttgacgctggcggatagcaagtcgatcgcgcaaagcacgcgaattgcacgcacgctg
tcggcaccggactcgccgctcaaacaattcctgcaggccgccgcccgcgagacgaatctg
tcgcgagccgcctccccgaccgagcagcggcccacggcggatcgcctgcagcaacgcctc
ggcgaagcgcgccgatcgctcgcggcgatgttcggcaacgccgcgcccgccgcgccgcaa
gcggctgacgaagaccgtcccgaagccatggtcgacgcgcatttcgaaccgctgcggcgc
ctcgtcacctcgtccgacggcggcgcagcgggcacggcgccgttcgacggcaacctgcat
gtggtcgacgagttgtacagctatctgacctcggcgagcgcggcgctcaacagcggcaat
tcgccgccacccaccgacgtgttcgacaaactgcaggccgacgccggacgcatgccgatg
ccgttgcgcaaaatgttcggcgatctgtcgcaaaacggctcggcgcaggtgggcggcgcg
ctgcgcgccaacctcgcgcaggacgcgcagggcggcgtaggccgactgtgccggcacatg
atcgccggacgctatccgtttgcgcgcaactccagccgggacgtcgcgctcgacgatttt
tcgaaactgttcgccccgggcgcgttgatggacagcttctttcaaaaaaatctggcgtcg
caaatcgacgtcagcgggagccgttggcgcttcaggcgcgacgcgaccggctccgccccg
ggcgacgcccgtctggccggctcgttccagaacgccgacatcatccgcacggcgtttttc
tcgggcagtgccacgatgccggcgctgcaggtcgagctgacgccgctcgagctggacccg
gggatcgcacagtacacgctggacgtcgacggtcaaactatccgctacgcacacggcccg
caattccccaccacggtgaaatggcccagccccaacggcagcggcggcggcggcggcggc
ggcggccaggtcagtctgcagatcagcacgccgggaggcaccgacggcctgcaaactcag
ggaccgtgggcgctgcaccgcctgctcgacaaggcacgtatcgcgccgggcgcgacaccc
gaaacctttgtcgccaccttcgacttcaacggccgcaagctatctttgcgggttatcgcc
aacagcagctacaacccgttcaggttgccgcaaatggatgcgttctcgggtccgtcctaa

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