Paraburkholderia bryophila: NDK50_18575
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Entry
NDK50_18575 CDS
T08797
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
pbry
Paraburkholderia bryophila
Pathway
pbry00300
Lysine biosynthesis
pbry00550
Peptidoglycan biosynthesis
pbry01100
Metabolic pathways
pbry01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NDK50_18575 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NDK50_18575 (murF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
NDK50_18575 (murF)
Enzymes [BR:
pbry01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
NDK50_18575 (murF)
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
WCM19403
LinkDB
All DBs
Position
1:complement(4132742..4134172)
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AA seq
476 aa
AA seq
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MSQSGNAMFSLREAAALIPGATVLGDDSVTIERISTDSRSAGPGDLFIAIKGERFDAHDF
LPQVAARNVTAALVTRAPANWSVPSLLVTTDTRVALGALARGWRRQFSMPLVAVTGSNGK
TTVKEMIASIFAAAVGEQNRLATAGNFNNDIGLPLTLFRLHAAHQLAVVELGMNHPGETS
LLAKLAEPTVAVVNNAQREHQEFMATVEAVALEHASVIHALSPEGVAVFPADDAYASIWR
VAATGSRIMDFALNSAERVTEAAVKGSFNGSVLSIDTPQGHLDVTLQVLGNHNAHNALAA
TSAALAAGVPLDAIKRGLESFGAVKGRLQVKHAAVGALTGATVIDDTYNANPDSMRAAID
VLASCASPRVLVMGDMGEVGDNGPAFHREIGAYAKERGIDALYAMGDASRDACTAYGADA
HHVADVGALVAQLQQAGFGPAATLLVKGSRFMQMERVVDAVTSPQPNAAGTMPAAH
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgagccagtcaggcaatgccatgttctcgctgcgtgaagccgccgcgctgattccgggc
gccaccgtgctcggcgacgacagcgtgacgatcgagcgcatttcgaccgacagccgcagc
gccggcccgggcgatctgttcattgcgatcaagggcgagcgcttcgacgcgcacgacttt
ctgccgcaagtcgcggcgcgcaacgtgacggccgcgctggtcacgcgcgcgccggcgaac
tggagcgtgccgtcgctgctcgtgacgaccgatacccgcgtcgcgctcggcgcgctcgca
cgcggctggcgtcgtcaattcagtatgccgctcgtcgcggtgacgggcagcaacggcaag
accacggtcaaggaaatgatcgcgtcgatcttcgccgccgccgtgggcgaacaaaatcgg
ctcgccaccgccggcaacttcaataacgacatcggcttgccgctcacgttgttccgtctg
cacgccgcgcatcaactggcggtggtcgaactcggcatgaatcatccgggcgaaacctcg
ttgctggcgaagctcgccgagccgaccgtcgccgtggtgaacaacgcgcagcgcgagcat
caggaattcatggcgaccgtcgaagcggtcgcgctcgaacatgcgagcgtgattcacgcg
ctgtcgccggaaggcgtggccgtgttccctgccgacgacgcctacgcgagcatctggcgc
gtggccgccaccggcagccgcatcatggactttgcgctgaactccgccgagcgcgtgacc
gaagccgccgtcaaaggcagctttaacggcagcgtgttgagcatcgacacgccgcaaggc
cacctcgacgtcacgctgcaggtgctcggcaatcacaacgcgcacaacgcgttagccgcg
acatccgcggcgttggctgcaggcgtcccgctcgacgcgatcaagcgcggcctcgaatcg
ttcggcgccgtgaagggccgcttgcaggtcaagcacgcggccgttggcgcgttgaccggc
gccaccgtgatcgacgacacctacaacgccaaccccgactcgatgcgtgccgcgatcgac
gtgctcgcgtcgtgcgcatcgccgcgcgtgctggtgatgggcgacatgggcgaagtcggc
gacaacggtccggcgttccatcgcgaaatcggtgcctacgcgaaggaacgtggtatcgac
gcgctatacgcaatgggcgacgcctcgcgcgacgcctgcaccgcgtatggcgcagacgct
caccacgtggccgacgtcggcgcgctggtcgcgcaattgcagcaggccggtttcggtcct
gcggcaacgcttctcgtgaaaggctcgcgcttcatgcaaatggaacgcgtggtggacgcc
gtgacgagtccacaacccaacgcagcgggcacgatgcccgccgcacattga
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