Paraburkholderia bryophila: NDK50_18735
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Entry
NDK50_18735 CDS
T08797
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pbry
Paraburkholderia bryophila
Pathway
pbry03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NDK50_18735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbry03400
]
NDK50_18735
Enzymes [BR:
pbry01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NDK50_18735
DNA repair and recombination proteins [BR:
pbry03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NDK50_18735
Prokaryotic type
NDK50_18735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WCM19429
LinkDB
All DBs
Position
1:4169116..4169952
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AA seq
278 aa
AA seq
DB search
MTSASRNRSNSSQASLFGDAAPSPTDASTNPVSPSSAGAPPALEAQFAALPPAWRTHLKP
FIESDAYAPLCRFVDGERSAGKTVYPADVFRALRLTSPDEVKVVILGQDPYHGEDRGTPQ
AHGLAFSVAPNVRTPPSLRNILKEIAASLGHDTPRHGCLDTWAKQGVLLLNTVLTVERDA
AASHAKRGWEKCTDALIHELAMRHDGLVFMLWGAHAQAKRALLGGKSHYVLEAPHPSPLS
AHRGFLGCGHFAKANEYLAQHGRATIDWRLPDEAQMLA
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgacctccgcttcccgtaatcgctccaattcgtcgcaggcttcgcttttcggcgacgcc
gcgccctctcccaccgacgcatcgaccaatccggtttcgccttcatcggctggcgcgccg
cctgccctcgaagcccaattcgccgccctgccccccgcatggcgcacgcatctcaagccg
ttcatcgaaagcgacgcctacgcaccgctgtgccgtttcgtcgacggtgaacgctcggcc
ggcaagaccgtttatcccgccgatgtattccgcgcgctgcgcctgacaagccccgacgaa
gtgaaagtcgtgatcctcggccaggatccgtatcacggggaagatcgcggcacgccgcaa
gcgcacgggctggcattctcggtagcgccgaacgtgcgcacgccgccgtcgctgcgcaac
atcctcaaggaaatcgccgcgagccttggccacgacacgccgcgccacggctgcctcgac
acgtgggccaaacagggcgtgctgctgttgaacacggtgctgacggtcgagcgcgacgct
gcggcgagccacgcaaaacgcggctgggaaaagtgtacggacgcgctgatccatgaactc
gccatgcgtcacgacggcttggtgttcatgctgtggggcgcgcacgcgcaagcgaagcgc
gcgctgctcggcggcaaatcgcactatgtgctggaagcgccgcatccgtcgccgctgtcg
gcgcatcgcggctttctcggctgcgggcattttgcgaaggcgaacgagtatctcgcgcaa
cacggccgcgcaacgatcgactggcgcttgccggacgaagcgcagatgctggcataa
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