Paraburkholderia bryophila: NDK50_19780
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Entry
NDK50_19780 CDS
T08797
Symbol
rtcR
Name
(GenBank) RNA repair transcriptional activator RtcR
KO
K14414
transcriptional regulatory protein RtcR
Organism
pbry
Paraburkholderia bryophila
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbry03000
]
NDK50_19780 (rtcR)
Transcription factors [BR:
pbry03000
]
Prokaryotic type
Other transcription factors
Others
NDK50_19780 (rtcR)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA
Mg_chelatase
AAA_5
AAA_22
AAA_16
NACHT
AAA_2
MCM
AAA_30
AAA_33
AAA_7
AAA_14
AAA_19
ATPase_2
TniB
T2SSE
Motif
Other DBs
NCBI-ProteinID:
WCM19621
LinkDB
All DBs
Position
1:complement(4370514..4372115)
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AA seq
533 aa
AA seq
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MKKRVVIGFLGVTLDQGRTRRWQRWRPTISLCEQPDLPIHRLELLYPPGYESLANRVKND
LGGVSPLTEVRLTPLVTQDPWDFEEVYASLHDFARGYTFDIDNEEYLVHITTGTHVAQIC
WFLLTEARYLPARLVQTAPPQQTDEGDSGPGTVSIIDLDLSRYNHIAQRFKREREETVSF
LKAGIATRNPRFNALIDQIERVAVRSRAPILLIGPTGAGKSFLARRVYELKRNRHQLDGS
FIEVNCATLRGDSAMSTLFGHVKGAFTGAQSARGGLLRAANRGLLFLDEIGELGMDEQAM
LLKAVEEKRFSPVGADVEVSSDFQLIAGTHRDLRTMVAQGAFREDLYARINLWTYDLPGL
AGRIEDIEPNLEFELDRFGQEQGEQVRFNVEARRLYLDFATSAKAAWTGNFRELSASVTR
MATLADAGRITEDNAAQEVERLQRTWTPPSADADAVTRTLGARADEYDLFDRLQLQRVLE
VCETSTSLSDAGRKLFAVSRQSRKQPNDADRLRKYLARFDVEWGDWLSVHDDR
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagcgggtggtcatcggttttctcggcgttaccctggaccaggggcgtacgcgg
cgctggcagcgctggcgacccacgatcagcctgtgcgaacagccggacttgcctatccac
cggcttgagttgctatacccgcccggctacgaatcgctcgccaatcgcgtgaaaaacgat
ctcggcggtgtctcgcccttgaccgaggtgcggctgacgccgctcgtcacgcaagatcca
tgggacttcgaagaggtctacgcgtcgctgcacgatttcgctcgcggctatacgttcgat
atcgacaacgaggaatatctcgtccacatcaccacgggcacccacgtcgcgcagatctgc
tggttcctgctgaccgaagcgcgctacctgccggcgcgtcttgtgcagaccgctccaccg
cagcaaaccgacgaaggcgatagcgggcctggcacggtgtcgatcatcgatctcgatctg
tcgcgctacaaccatatcgcgcagcgctttaagcgcgagcgcgaggaaaccgtgtctttc
ctgaaggccggcattgccacgcgcaatccgcgcttcaacgcgctgatcgatcagatcgag
cgcgtcgcggtccgctcgcgggcgccgattctgctgatcggtcccaccggcgccggcaag
tcgtttctggctcggcgcgtctatgaactcaagcgcaaccggcaccaactggacggttcg
ttcatcgaggtgaactgtgcaaccttgcgcggtgactcggcgatgtcgacactcttcggc
cacgtcaaaggcgccttcaccggggcgcaaagcgcgcgcggcggcctgctgcgtgcggcc
aaccggggcttgctgtttctcgatgaaatcggtgaattgggcatggacgagcaggcaatg
ctgctgaaggccgtggaggaaaagcgtttttcgccggtcggcgccgacgtggaagtgagt
agcgattttcagttgatcgccggcacgcatcgcgatttgcgcacgatggtcgcgcagggc
gccttccgcgaggatctatacgcgcggatcaacctgtggacttacgacttgccaggcctc
gccgggcgcattgaagatatcgaaccgaatctggagtttgagctggatcgcttcgggcag
gagcagggcgaacaggtgcgtttcaatgtcgaagcgcggcgcctttatctcgacttcgcg
acatccgcgaaggccgcctggacgggcaactttcgcgagttgtcagcgtcggtgacacgt
atggcgaccctcgcggacgccgggcgcatcacggaagataacgcggcgcaggaggtcgag
cgcttgcagcgaacgtggacgccgccgtcggccgacgcggatgcagtgacccgcacgctc
ggcgcgcgtgccgacgaatacgacctgttcgatcggcttcaattgcagcgtgtgctggag
gtctgcgaaacgtcgacgagtttgtccgacgcaggccgcaagctcttcgcagtttcgcgg
caaagcagaaagcagccgaatgacgctgatcggctgcgcaaatatctggcccgcttcgac
gtggaatggggcgactggctatccgttcacgacgacaggtga
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