Paraburkholderia bryophila: NDK50_19980
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Entry
NDK50_19980 CDS
T08797
Name
(GenBank) ABC transporter substrate-binding protein
KO
K12368
dipeptide transport system substrate-binding protein
Organism
pbry
Paraburkholderia bryophila
Pathway
pbry02010
ABC transporters
pbry02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NDK50_19980
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
NDK50_19980
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pbry02000
]
NDK50_19980
Transporters [BR:
pbry02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Dipeptide transporter
NDK50_19980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
WCM19659
LinkDB
All DBs
Position
1:complement(4410118..4411746)
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AA seq
542 aa
AA seq
DB search
MKQNNLLRAVRVTTLVAAAAASMVGASVARAEIPNKTLVYCSEGSPAGFDPAQYTTGTDF
TANTFTVYNRLVEFERGGTKVEPGLAEKWEVSPDGKTYTFHLRHGVKFQTTSFFKPTREF
NADDVLFTFQRMLDPNSAFHKAYPVQFPYFTDMGLDKLITGVEKVDPYTVKFTLKEVNAP
FIQNLAMEYASILSSEYGDQLMKAGKAADINQYPVGTGPFIFRSYTKDATIRFDGNPDYW
KPNAVKISKLIFSITPDAGVRVQKIKRDECQVMSYPRPADIAPLKAESSLDMPSQPGFNL
GYLAYNVTHKPVDKLEVRQALDMAINKKAIIDSVYQGAGQAATNPMPPTQWSYDKNLKGA
AYDTDKAKALLAKAGFPNGFDITLWAMPVQRAYNPNARLMAEMIQADWAKIGVKAKIVTY
EWGEYIKRAHAGEDDTMLIGWTGDNGDPDNWLGTLLGCEAVNGNNFSKWCYKPFDDLIQK
GRVTSDQAGRTSAYMQAQQIFAQQLPFSPIAHSTVYQPVSKKVVDMRIEPLGYARFDGVS
VK
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaaacaatctgttgcgcgccgtgcgtgttacgacgctcgtcgccgccgcagcg
gcatcgatggtgggcgccagcgtcgcgcgcgccgagattccgaataaaaccctggtttac
tgctcagaaggcagtcccgcgggtttcgatccggcccaatacaccacgggcaccgatttc
acggctaacacgttcaccgtctacaaccgcctcgtcgaattcgagcgcggcggcaccaag
gtcgagccgggcctcgccgaaaagtgggaagtgtccccggacggcaagacgtacaccttc
catctgcgtcacggcgtgaagttccagaccacgtcgttcttcaagccgacccgcgaattc
aacgcggacgacgtcctgttcacgttccagcgcatgctcgacccgaactcggcgttccat
aaggcgtatccggtccagttcccgtacttcacggacatgggcctcgacaagctgatcacc
ggcgtcgaaaaggtcgacccgtacacggtcaagttcacgctgaaggaagtcaacgcgccg
ttcatccagaatctggcgatggaatacgcgtcgatcctgtcgagcgaatacggcgaccag
ttgatgaaggccggcaaggccgccgacatcaaccagtacccggtcggcacgggtccgttc
attttccgcagctacacgaaagacgcgacgatccgcttcgacggcaatccggattactgg
aagccgaacgcagtgaagatctcgaagctgatcttctcgatcacgccggacgccggcgtg
cgcgtgcagaagatcaagcgcgacgaatgccaggtgatgagctatccgcgtccggccgac
atcgcgccgctgaaggctgaatcgagcctcgacatgccgtcgcaaccgggcttcaacctc
ggctatctcgcgtacaacgtcacgcacaagccggtcgacaagctcgaagtgcgtcaggcg
ctcgacatggcgatcaacaagaaggcgatcatcgactcggtgtatcaaggcgcgggccag
gccgcgacgaacccgatgccgccgacccaatggtcgtacgacaagaacctgaagggcgcg
gcctacgatacggacaaggccaaggcactgctcgcgaaggccggcttcccgaacggcttc
gacatcacgctgtgggcgatgccggtgcaacgcgcctacaacccgaacgcccgtctgatg
gcggaaatgatccaggccgactgggccaagatcggcgtgaaggcgaagatcgtcacgtat
gaatggggcgagtacatcaagcgcgcgcacgcaggtgaagacgacacgatgctgattggc
tggaccggcgacaacggcgatccggacaactggctcggcacgttgctcggctgcgaagcg
gtgaacggcaacaacttctcgaagtggtgctacaagccgttcgacgatctgatccagaag
ggtcgcgtcacgtcggatcaggccggccgcacctcggcttacatgcaggcgcagcagatt
ttcgcgcagcaactgccgttctcgccgatcgctcactccactgtttaccaaccggtcagc
aagaaggtggtcgacatgcgcatcgaaccgctcggctacgcgcgcttcgacggcgtcagc
gtcaagtaa
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