Paraburkholderia bryophila: NDK50_20555
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Entry
NDK50_20555 CDS
T08797
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pbry
Paraburkholderia bryophila
Pathway
pbry03420
Nucleotide excision repair
pbry03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NDK50_20555
03430 Mismatch repair
NDK50_20555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbry03400
]
NDK50_20555
Enzymes [BR:
pbry01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NDK50_20555
DNA repair and recombination proteins [BR:
pbry03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NDK50_20555
MMR (mismatch excision repair)
Other MMR factors
NDK50_20555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_30
UvrD_C_2
AAA_11
AAA_12
DEAD
ResIII
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
WCM19773
LinkDB
All DBs
Position
1:4537829..4539631
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AA seq
600 aa
AA seq
DB search
MTFVWTRTELNDEQSEAVREENSVFLVACPGSGKTRTLTYKIAYELSRLQSKRQFVVALT
YTHRAADEIHERIEGLGVDTSQLWIGTIHAFCLEWILKPYGIYEPALARGFRIMDSHEQE
KLLEELCRTQQGITYWDCEYYFTDQGYVLACSDQSKHERLHAIFALYFRRLADNRQIDFE
QILFYASRLIQSQPQIAKVLANIFSWMLVDEYQDTKRIQYEVVAAIVRAGAERTKLFVVG
DPNQAIFGSLGGFAMPVAELRQLCGVRLEERALSENYRSTDRLIRYFSNFTVQATDIRAA
ASDRAFPSSISYNTNVERDQLEAELVRLIRLSTAQGVTADQICVLAPWWILLAGVTRRLA
GALPEHQFDGPGMVPFSRDHENFWYRLSRIALTEASPAQHVRRQRWAAEVIRDLGNEGID
TRALSAKRLLRECNSIQLHQPDGLLYLRDFFASLMTCLGVHWQSHPLLSEHHEAFFDSSA
AKIDRLRREGATYIGGIDFFRKVFQHRSGITVNTIHGVKGAEFDVVIAFGLLQGMVPHFS
EEAEADGGINSAKKLLYVVGSRARKHLHLISERQRMRGGGRGPYAATDTLAACVFDYDIV
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
gtgacgttcgtctggactcggaccgagctgaatgatgaacagtcggaggctgtacgcgaa
gagaacagcgtgttcctggttgcctgcccgggcagcggaaagaccagaacacttacttac
aagatcgcttatgagctgtcacgcctgcagagcaagcggcagttcgtcgtcgctctcacc
tatacgcaccgagcggccgacgaaattcatgagcgtatcgaagggcttggcgtcgacacg
tcgcagttatggatagggacgattcacgccttctgtctggaatggattctgaagccctac
ggcatctacgagcctgcgttagcgcgtggcttccggatcatggacagccatgagcaagag
aagctactggaagaactgtgccgaacgcagcaaggaatcacctactgggactgcgaatac
tatttcacggatcaagggtacgtactggcgtgcagtgatcaaagcaaacacgaacggctt
catgccatctttgcgctgtacttccgccgtctcgcggacaacaggcaaattgacttcgag
cagatcctcttctatgcgtcgcgcctgatccaaagtcaacctcagatcgcgaaggtcttg
gctaacatcttctcgtggatgctggttgacgaataccaggacacgaagaggattcaatac
gaggtcgttgccgccatcgtgagggctggagctgagcgaacaaaactgtttgttgtgggc
gatcccaaccaggcgatctttggctcgcttggtggcttcgcgatgccggttgccgaactt
cggcagctctgtggtgttcgactggaggagcgcgcactgtctgaaaactatcggtccacc
gatcggctgatcaggtacttctcgaacttcactgttcaggctaccgacattcgcgcagcc
gcgtccgaccgagcgttccccagcagcattagctacaacaccaatgtggagcgagaccag
ctagaggccgagcttgtgagactaatcaggctcagcaccgcccaaggggttaccgcggat
cagatctgtgttctggcgccgtggtggattctgttggcgggagtgacacgtcgacttgca
ggcgctttgcctgagcaccagttcgatggcccaggcatggtccccttcagccgagatcac
gagaacttctggtaccggttgtcgcggatcgcactgacggaggcgtcccccgcgcagcat
gtgcggcggcagcgttgggcggcagaggtgattagagacctaggcaatgaaggcatcgac
actcgggcgctgtccgctaagcggcttcttcgggagtgtaattccatccagctgcatcag
cctgacgggctgctatatctcagggatttcttcgcttcgttgatgacttgcctcggcgtt
cactggcaatcacatcctttgctctcggagcaccatgaagccttctttgacagttcggcc
gcgaagattgatcggctacgcagggaaggagccacgtacattggcggaatcgacttcttc
cgcaaagtgttccaacaccgaagcggcatcaccgtcaacaccatccatggcgtcaagggt
gcggagttcgatgtagtgatagcgttcggcctgctgcagggaatggtcccgcatttcagc
gaagaagcggaggcagatggaggcatcaacagcgccaaaaagttgctctacgttgttggc
tctcgggctcgcaaacatcttcatctgatctcggaacggcaacgcatgagaggtggaggg
cgaggcccgtacgcggcaacggacacgcttgctgcatgcgtgttcgactacgacatcgtg
tag
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