Paraburkholderia bryophila: NDK50_20715
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Entry
NDK50_20715 CDS
T08797
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
pbry
Paraburkholderia bryophila
Pathway
pbry00260
Glycine, serine and threonine metabolism
pbry00630
Glyoxylate and dicarboxylate metabolism
pbry00670
One carbon pool by folate
pbry00785
Lipoic acid metabolism
pbry01100
Metabolic pathways
pbry01110
Biosynthesis of secondary metabolites
pbry01200
Carbon metabolism
Module
pbry_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NDK50_20715 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NDK50_20715 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
NDK50_20715 (gcvP)
00670 One carbon pool by folate
NDK50_20715 (gcvP)
Enzymes [BR:
pbry01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
NDK50_20715 (gcvP)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
WCM19803
LinkDB
All DBs
Position
1:4576467..4579403
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AA seq
978 aa
AA seq
DB search
MKLEHPDRLMNRTPLSLAALEVHDAFAERHIGPDTADQHAMLEALGFASRAALIDAVIPK
TIRRTETLPLGPFAQPKSEAEALAALRELADKNQVFRSYIGQGYYNAHTPTVILRNVLEN
PAWYTAYTPYQPEISQGRLEALLNFQQMIVDLTGLAISNASLLDEATAAAEAMTLLQRVG
KPKSNVFFVADDVLPQTIEVVKTRATPVGIEVKVGPAAEAASANAFGVLLQYPGVNGDVR
DYRALTEAIHAAGGHVVVAADLLALTVLTPPGEWGADVAVGNTQRFGVPVGFGGPHAAYL
AVRDEFKRQMPGRLVGVTVDAQGNPALRLALQTREQHIRREKATSNVCTAQALLAIMASM
YAVYHGPHGLKTIALRVNRIAALLAEGAKQLGYTLANENFFDTLTFNTGARTQALHDAAN
AKRINLRRVSATQVGLSIDETTSRRDLADLLAVFAEAAGSKDVPQIDTLDEKLAASNSAS
VPAALERTSAYLTHHVFNRHHSETEMLRYLRSLSDKDLALDRSMIPLGSCTMKLNATSEM
LPVTWPEFGQIHPFAPAGQTVGYREMIDQLEAMLVAATGYAAVSLQPNAGSQGEYAGLLI
IHAYHASRGEAHRNVCLIPASAHGTNPASAQMAGMQVVVVACDAQGNVDIDDLKKKADQH
ADKLAAIMITYPSTHGVFEANVREICEIVHAHGGQVYVDGANMNAMVGLTAPGQFGGDVS
HLNLHKTFCIPHGGGGPGVGPVAVGAHLAQFLPNQISSGYERAPNGIGAVSGAPFGSASI
LPISWMYIAMMGAKNLTAATETAILNANYVANKLAPHYPVLYSGPGGLVAHECILDLRPL
KETSGISVDDVAKRLADYGFHAPTMSFPVPGTLMVEPTESESKEELDRFIEAMIAIRDEI
RAVEDGRSDREDNPLKHAPHTAAVVIADDWKHAYARETAAYPLPTLIAKKYWPPVGRADN
VYGDRNLFCSCVPIADYE
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgaacacccggatcgtctgatgaaccgcactcctctctcgctcgccgcgctc
gaagtgcatgacgccttcgccgaacggcacatcggcccggatacggccgaccagcacgcc
atgctcgaagccctcggcttcgcgtcgcgcgcggcgctgatcgacgccgtcattccgaag
acgatccgccgcaccgaaacgctgccgctcggccccttcgcgcaaccgaagagcgaagcc
gaagcgctcgccgcgctgcgtgaactcgcggacaagaaccaggtgttccgctcgtacatc
gggcagggctattacaacgcgcacaccccgacggtgatcctgcgcaacgtgctggaaaat
ccggcgtggtataccgcgtacacgccgtaccagccggaaatctcgcaaggccgtctcgaa
gcgctgctgaactttcagcagatgatcgtcgacctgaccggtctggcgatctcgaacgcg
tcgctgctcgacgaagccaccgccgccgccgaagccatgacgctgctgcagcgcgtgggc
aaaccgaagtcgaacgtgttcttcgtcgccgacgacgtgctgccgcaaaccatcgaagtg
gtgaagacgcgcgccacgccggtcggcatcgaagtgaaagtaggcccggctgccgaagcc
gccagcgcgaatgcgttcggcgtgctgctgcaataccccggcgtgaacggcgacgtgcgc
gactaccgcgcgctcaccgaagcgatccacgccgcgggcggtcatgtggtggtcgccgcc
gacctgctcgcgctgaccgtgctcacgccgccgggcgaatggggcgcggacgtggccgtc
ggcaacacgcagcggttcggcgtgccggtcggtttcggcggtccgcacgcggcgtacctc
gcagtgcgcgacgaattcaagcggcagatgccgggccgcctcgtcggcgtgaccgtcgac
gcgcaaggcaatcccgcgctgcgtctcgcgctgcaaacgcgcgaacagcatattcgccgc
gagaaggcgacttcgaacgtgtgtaccgcgcaagcgctgctcgcgatcatggccagcatg
tacgcggtgtatcacggcccgcacggtctgaagacgatcgcgctgcgcgtgaaccgtatc
gccgcgctgctcgccgagggcgcgaagcaactcggctacacgctcgccaacgaaaacttt
ttcgacacactcacgttcaataccggcgcgcgcacgcaagcgctgcacgacgcggcgaac
gcgaagcgcatcaacctgcgccgcgtgagcgccacgcaagtgggcctgtcgatcgacgaa
accacgtcgcgtcgcgacctcgccgatctgcttgcggtgttcgccgaagcggccggttcg
aaagacgtgccgcaaatcgacacgctcgacgaaaaactcgcggcctcgaacagcgcctcg
gtgccggccgcgctcgaacgcaccagcgcgtacctcacgcaccatgtgttcaatcgtcac
cactcggaaacggaaatgctgcgctatctgcgcagtctctccgacaaggacctcgcgctc
gaccgttcgatgatcccactcggctcgtgcacgatgaagctgaacgcgacgtcggaaatg
ctgccggtcacctggcccgaattcggtcagatccatccgttcgcgccggccgggcaaacc
gtcggttaccgcgaaatgatcgatcagctcgaagcaatgctggtcgcggcaacgggttac
gcggcggtctcgctgcaaccgaacgccggctcgcaaggcgagtacgccggtctgctgatc
atccacgcgtatcacgcgtcgcgcggcgaagcgcatcgcaacgtctgcctgattcccgcc
tcggcgcacggcacgaacccggcctcggcgcaaatggccggtatgcaggtggtcgtggtg
gcatgcgacgcgcaaggcaacgtcgatatcgacgacctgaagaagaaggccgatcaacac
gccgacaaactcgcggcgatcatgatcacgtatccgtccacgcacggcgtgttcgaggcg
aacgtgcgcgaaatctgcgagatcgtgcatgcgcacggcggccaggtgtacgtggacggc
gcgaacatgaacgccatggtcggtctgaccgcgccgggccagttcggcggcgacgtctcg
cacctgaacctgcacaagacgttctgcattccgcacggcggcggcggaccgggcgtcggt
ccggtcgcggtcggcgcgcatctcgcgcagttcctgccgaaccagatctcgtcgggctat
gagcgcgcgccgaacggcatcggcgcagtgtcgggcgcaccgttcggttccgcctcgatt
ctgccgatctcgtggatgtacatcgcgatgatgggcgcgaagaatctcaccgccgcaacc
gaaaccgccatcctcaacgcgaactacgtcgcgaacaaactggcgccgcattatccggtg
ctgtattcgggccccggcggactggtcgcgcacgaatgcattctcgatctgcgtccgttg
aaggaaaccagcggcatcagcgtcgacgacgtcgccaagcgtctcgccgactacggcttc
cacgcgccgaccatgagcttcccggtgccgggcacgctgatggtcgagccgaccgaatcg
gaatcgaaggaagaactcgaccgtttcatcgaagcgatgattgcgatccgcgacgaaatc
cgcgcggtggaagacggccgctcggaccgcgaggacaatccactgaagcacgcgccgcac
accgcggccgtcgtgatcgccgacgactggaagcacgcgtatgcgcgcgaaaccgctgcg
tatccgctgcccacgttgatcgcgaaaaagtactggccgccggttggccgtgctgacaac
gtgtacggcgaccgcaatctgttctgctcctgcgtgccgatcgccgactacgagtaa
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