Paraburkholderia bryophila: NDK50_20755
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Entry
NDK50_20755 CDS
T08797
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pbry
Paraburkholderia bryophila
Pathway
pbry03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NDK50_20755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbry03400
]
NDK50_20755
Enzymes [BR:
pbry01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NDK50_20755
DNA repair and recombination proteins [BR:
pbry03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NDK50_20755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_16
AAA_30
Zn_ribbon_6
AAA_19
ADDB_N
Zn-ribbon_GIR1
DUF5817
Zn_ribbon_RPAB4
Motif
Other DBs
NCBI-ProteinID:
WCM19811
LinkDB
All DBs
Position
1:complement(4590231..4592477)
Genome browser
AA seq
748 aa
AA seq
DB search
MSDVFVRVALDHPLPTLFDYRCDTPGLAEPGMLVSVPFGKRHVVGLVCEVTAHSDVPADR
LRAVSAMCTACPPVSPEWLALTAFAADYYQRGLGEVALPALPQALRDASRWSRLFAPEER
YSLTAEGRAALPGALPARASALRKLAEALAEVEFLLAADARALHPKAIATFEAWQAEGWL
ALEVIEAAAVVGAAAAPEMPAPTLPTLTDEQAAAVEAIRDATGFAPFLLHGVTGSGKTEV
YLRALAEILAARPDAQALVLVPEINLTPQFEAAFRARFAALEGTSIVTLHSGLAEGERAR
NWFAAHTGRARIVLGTRLAILASLPKLAVIVVDEEHDPAYKQQEGLRYSARDLAIYRAKQ
LGLPVVLGSATPSLESWWQADQGRYKRLTLSRRAVADAVLPTVRLIDLEEERRRGRASVE
GLSGPLIAALKARLERGEQSLVFLNRRGYAPQLACDACGWVAGCPRCSAYVVLHKPERAL
RCHHCGWESRIPRSCPDCGNVDIAPMGRGTQRVEETLASAVPGARVLRIDADSTRRKGSA
QALFSDVHAGEVDILVGTQMIAKGHDFQRVSLVGVLNADTALFSHDFRASERLFAQLMQV
SGRAGRSGLPGEVLVQTRYPRHALYHALGRQDYVGFANSTLAERRDAHLPPFVYQALLRA
EGRTLEAAIAFLQQAAAALTSIPAAERVTVYDAVPLTIVKVMHVHRAQLLIESASRAALQ
ATLRAWQPLLRGLKGVLRWSVEVDPLDI
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacgtgttcgtccgcgttgcgctggatcatccgctgccgactttgttcgactat
cggtgcgacacacccggactcgccgagcccggcatgctggtcagcgtgccgttcggcaag
cgccacgtcgtggggctcgtctgcgaagtaaccgctcacagtgacgtgcccgccgatcgg
cttcgcgcggtcagcgccatgtgcacagcttgtccgccggtgtcgccggagtggctcgcg
ctgaccgcctttgctgccgattactatcaacgcggcctcggcgaagtcgcattgcccgcg
ctgcctcaagcgctgcgcgacgcctcgcgctggtcgcgcctgtttgcacccgaagagcgc
tacagcctcacagccgaaggacgcgccgcgttgcccggcgctttgccggcgcgcgccagc
gcgctgcgcaagctcgccgaggcactcgccgaagtcgaattcctgctggcggccgacgcc
cgcgcgctgcaccccaaagcgatcgccacttttgaggcgtggcaagcggagggctggctc
gcgctggaagtgatcgaagccgccgccgtggtcggcgcggcggcagcgcccgagatgccg
gcgcccacgctacccacgctcaccgacgagcaggccgccgccgtcgaggccattcgcgac
gcgaccggtttcgcgccgttcctgctacacggcgtgacgggcagcggcaagaccgaggtc
tatctgcgcgcgctggccgagattctcgcggccagacccgacgcgcaggcgctcgtcctc
gtacccgaaatcaatctgacgccgcagttcgaagcagccttccgcgcccgctttgccgcg
ctcgaagggacgtcgatcgtcacgctgcacagcggtctcgccgaaggcgaacgggcgcgc
aactggttcgccgcgcacaccggccgcgcccggatcgtgctcggcacgcggctcgcgatc
ctcgcgtcgctgccgaagctggcggtgatcgtcgtcgatgaagaacacgatccggcctac
aagcagcaggaaggcctgcgctattcggcgcgcgatctggcgatttaccgcgccaagcag
ctcggtttgccggtcgtgcttggctcggcgacgccgtctctggaaagctggtggcaggcc
gaccaagggcgctataaacggctcacgctgtcgcgccgcgcggtggccgacgccgtgctg
cccaccgtccggctgatcgatctggaagaggagcggcggcgcggacgggcatcggtggaa
ggtctgtcggggccgctgatcgcggcgctgaaggcccggctcgaacgcggcgaacaaagt
ctcgtgttcctgaaccgacgcggctacgcaccgcaactcgcctgcgacgcctgcggttgg
gtcgccggttgtccgcgctgtagcgcgtacgtggttttgcataagcccgagcgcgcgctg
cgctgtcaccactgcggttgggagtcgcgcattccgcgttcgtgccccgactgcggcaac
gtcgacatcgcgccgatggggcgcggcacgcagcgcgtcgaagaaacgctggcgagcgcg
gtgcccggcgcccgcgtgctgcgtatcgacgccgacagcacgcgccgcaaaggcagcgca
caggcgctgttctccgacgttcacgcgggcgaagtcgatattctggtcggcacgcagatg
atcgcgaagggccacgattttcaacgcgtgtcgctggtgggggtgctgaacgccgacacg
gcactgttttcgcacgacttccgcgcgagcgagcgcctcttcgcgcaactgatgcaggtg
agcggccgcgccggccgttcgggtttgcccggcgaagtgctggtgcagacgcgttatccg
cgccatgcgctgtatcacgcgttgggtcgtcaggactacgtcggctttgccaattcgacc
ttggccgagcgccgcgacgcgcatttgccgccgttcgtttatcaggccttgctgcgcgcc
gaagggcgcacgctcgaggccgcgattgcgttcctgcagcaggccgcggcggcgctgacc
agcattccggccgccgaacgcgtgacggtctacgacgcggtgccgctcaccatcgtcaag
gtgatgcacgtgcatcgcgcgcagttgctgatcgaaagcgcctcgagggcggcgttgcag
gcgacgttgcgcgcgtggcagccgctgctgcgcggcttgaaaggcgtgctgcgctggagt
gtcgaagtcgatccgctcgacatctga
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