Paraburkholderia bryophila: NDK50_21700
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Entry
NDK50_21700 CDS
T08797
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pbry
Paraburkholderia bryophila
Pathway
pbry00300
Lysine biosynthesis
pbry00470
D-Amino acid metabolism
pbry01100
Metabolic pathways
pbry01110
Biosynthesis of secondary metabolites
pbry01120
Microbial metabolism in diverse environments
pbry01230
Biosynthesis of amino acids
Module
pbry_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NDK50_21700 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NDK50_21700 (lysA)
Enzymes [BR:
pbry01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
NDK50_21700 (lysA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WCM23487
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All DBs
Position
2:85463..86707
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AA seq
414 aa
AA seq
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MPFNPLQLVELAQQHGTPLWVYDADVIHQRIAELRSFDVIRYAQKACSNLHILKLMRDAG
VMVDAVSHGEIVRSLAAGFTPEGDPEGVVFTADLIDHATLDTVLEHRITVNAGSLDMLER
VGRHAPEGHRVWLRINPGFGHGHSNKTNTGGEHSKHGIWLDDLPKALEIVRGYRLKLVGL
HMHIGSGVDYEHLSRVCDAMVEAVKSLQGHDIEAISAGGGLSVPYKYGDQRIDVEHYFRL
WDAARRQIEAQVGHRVRLEIEPGRFLVAEAGVLVAEVHALNRRPSRQFALVDAGFNDLMR
PSLYGSHHEMTVLKRDGTPSGAALDAFAVAGPLCEAGDVFTQAEGGVVLNRTMPTPAIGD
FVVFRDAGAYGAAMSSNYNSRPLAPELLLENGQARVIRRRQTIDELIALENTTG
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgccattcaatccgctacaacttgtcgaactggcccagcaacacggcacgccgttgtgg
gtctatgacgccgacgtgatccatcaacggatcgccgaactgcgcagtttcgacgtgatt
cgctacgcgcagaaagcctgttcgaatctgcacattctgaagctgatgcgcgacgcgggc
gtcatggtcgacgcggtgtcgcacggggaaatcgtgcgcagtcttgcagcggggtttaca
ccagaaggcgatccggaaggcgtggtttttacggcggatctgatcgatcacgcgacgctc
gacaccgtgctcgaacatcgcattacggtcaacgccgggtcgctggatatgctcgaacgc
gtcggccggcacgcgcccgaaggtcatcgcgtgtggctgcggatcaaccccggttttggc
cacgggcatagcaacaaaaccaacacgggcggcgaacacagcaagcacggcatctggctc
gatgacttgccgaaggcgctggaaatcgtgcgtggttatcggttgaagctggttgggttg
cacatgcatatcggctcgggcgtggactacgagcatctgtcgcgggtttgcgatgcgatg
gtcgaggcggtcaaaagcctgcaaggccacgatatcgaagcgatctcggcaggcggcggt
ttatcggtgccgtacaagtatggtgaccagcgtatcgacgttgagcattatttccggttg
tgggacgcggcgcgtcggcagatcgaggcgcaggtcgggcatcgcgtgaggcttgaaatc
gaaccggggcgtttcctggtcgccgaagcgggcgtgctggttgccgaggtgcatgcgttg
aatcggcgtccgtcgcggcaattcgcgttggtcgacgccggattcaacgatctgatgcgg
ccgtcgctctacggcagtcatcatgagatgaccgtgctgaaacgcgacggtacgcccagc
ggtgcagcgctcgacgcgttcgccgtagcgggcccgctctgcgaagccggcgatgtcttc
acgcaagcggagggcggcgtggttctgaaccggacaatgcccacgccggcgattggcgac
tttgtcgtgtttcgcgatgcgggtgcgtacggtgcggcgatgtcatcgaactacaacagc
cggccgcttgcgcctgaactgctgctggagaatggccaggcgcgcgtgatccggcggcgc
caaactatcgacgaattgatcgcgctcgaaaacacgaccggttga
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