Paraburkholderia bryophila: NDK50_23300
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Entry
NDK50_23300 CDS
T08797
Name
(GenBank) peptidase domain-containing ABC transporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
pbry
Paraburkholderia bryophila
Pathway
pbry02010
ABC transporters
pbry03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NDK50_23300
03070 Bacterial secretion system
NDK50_23300
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pbry02000
]
NDK50_23300
02044 Secretion system [BR:
pbry02044
]
NDK50_23300
Transporters [BR:
pbry02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NDK50_23300
Secretion system [BR:
pbry02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
NDK50_23300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
cNMP_binding
ABC_tran
SMC_N
AAA_22
AAA_25
Guanylate_cyc_2
nSTAND3
AAA_29
NB-ARC
AAA_23
MobB
AAA_15
NACHT
DUF87
Motif
Other DBs
NCBI-ProteinID:
WCM23782
LinkDB
All DBs
Position
2:437695..440751
Genome browser
AA seq
1018 aa
AA seq
DB search
MDAPQTAPSAAEFLASVEILSPFSRDEIERLADYAQARFYTFGETVCSAGETAGGLYVVR
SGTVRLFTEEHGKETSIGVRKSGEIFADIAMLRAYAHEASVRASAKTELLFIPREAIEPV
ISGNPAALAFVASYVAISSAGGFVAQLFDLRGKLNKAELEEYVRSVGVKRVAAGKEIFRQ
DGRDDRRLYVVRQGEVRIVRQEEGHDYTLATLGEGEIFGEKACLMRQEQMASAVAVTDTR
LLVIPERTVHFILERNPKLREVLDERIRYGDRELQRQKRLEQRRKLPLMLDLQSKPEFGE
KVIKRFALVEQAEEMDCGAACLAMVCRHYGIPMTLGKLRELANVTTQGATLDSLARAGES
LGFTARGVQCTFDSLRGFDLPFIVHWEGYHYVVVYGLSKDYVWVADPAVGFRKLSVEDFE
RGWSGTCLLFTGGPHLLQMSAARSPWIRFVGYLTPYKKILGHLFLATFVIQVLGVIPPLI
IQNILDGVIVHQNVSLLHLLIGGLIIANVFSQLMSSIRAYLANFMVRNMDFAMMSQFFKH
TLSLPFSFFAKRKTGDIFARFQENQTIRAFLTESTVTTALNLLMVFIYFTIMFVYNVKMT
LVLIAFVIPIMALTAIATPRIKSYAREVFTASTESKSFLMEALAGVETIKGMGIERPVRL
RWEKKYAKALEVQYRAHAFNILVGLGSQLLNAATTIAILWVGANLVLAREMTIGQLIAFN
AFMGSVLGPLMGLVGLWSMLNDAGVAMERLGDVLDIEPEQKPQDLPSRVMLPELQGEISL
SGVYFRYGDNDSSYVLENISFDIKPGELVAIVGRSGSGKTTLAKLLVGFYTPSEGKMTID
GYDLGVVDKAYYRAQIGYVMQNNLLFSGTIAENIASGDDAPERRRIEEVAKMADAHAFIS
KMPLGYEQIVGERGIGLSGGQIQRLCIARALYHDPRLLVFDEATSALDSQSESNILGNMH
DILKGRTAVIIAHRLSTIMRADKIIVLYEGAIVEQGRHDELIARGGMYYQLVQKQLSA
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atggacgcccctcagaccgcgccgtcagccgccgagtttcttgcctcggtggaaattctg
tcgccgttttcgcgcgacgaaatcgagcgtctggccgattacgcgcaggcacggttctat
acgttcggcgaaaccgtctgctccgccggtgagacggccggcggtctgtacgtggtgcgc
tccggcacggtgcggctcttcaccgaggaacacggcaaggagaccagcattggcgtgcgc
aagtccggcgagatattcgccgacatcgcgatgctgcgcgcctatgcccacgaagcgtcg
gtgcgggcgtcggcgaaaaccgagttgctgttcattccgcgcgaggcgatcgaaccggtc
atcagcggcaacccggccgcattggcgttcgtggccagttacgtggcgatcagttcggcg
ggcggcttcgtcgcgcagttgttcgatctgcgcggcaagctgaacaaggcggaactcgag
gaatatgtgcgcagtgtcggcgtgaaacgcgtggcggcaggcaaggaaatcttcagacag
gatggccgcgacgatcggcggctctacgtggtgcggcaaggtgaagtgcgcatagtccgg
caggaagagggccacgactacacgttggccacgctcggcgagggcgaaatattcggcgag
aaagcctgtttgatgcgccaggagcagatggcctcggccgtggcggtgaccgatacccgc
ctgctggtgattcccgagcgcacggttcatttcatcctggagcgcaaccccaaactccgc
gaagtactcgacgagcggatccgctatggcgaccgcgaattgcagcgtcaaaagcgtctc
gaacaacgacgcaaattgccgctcatgctcgacttgcagagcaagccggagttcggcgag
aaggtcatcaaacgcttcgcgctggtcgagcaggccgaagagatggattgcggcgccgcg
tgccttgccatggtgtgccgccactacggcattcccatgacgctcggcaagttgcgcgaa
ctggccaatgtgacgacccagggcgcgacactcgacagtctcgcgcgcgccggtgaatcg
ctcggttttaccgcgcgtggcgtgcagtgcacgttcgactcgctgcgcggcttcgatctg
ccgtttatcgtgcattgggagggctatcactacgtggtggtgtatgggctctcaaaagac
tatgtgtgggtggccgatccggcggttggcttcagaaaactgagcgtcgaggatttcgag
cgcggctggagcggcacatgtctgctatttaccggcggcccgcatctgttgcaaatgtcg
gccgcccgttcgccgtggatacgctttgtcggctacctcacgccgtacaagaagatactc
ggccacctgtttctcgccaccttcgtgatccaggtattgggcgtgattcccccgctgatt
atccagaacattctcgacggcgtgatcgtgcatcagaacgtcagcctgttgcatctgctg
attggcgggttgattatcgccaacgtattttcgcaattgatgtcgtcgattcgcgcttac
ctcgcaaacttcatggtgcgcaacatggacttcgcgatgatgtcgcagttcttcaagcac
accttgtcgctgccgttttcgttttttgccaaacgcaagacgggcgacatttttgcgcgc
ttccaggagaaccagacgattcgcgcgttcctcaccgaatccacggtgaccactgcgctg
aacctgctgatggtgtttatctacttcaccatcatgttcgtctacaacgtgaagatgacg
ttggtgttgattgcattcgtgattccgatcatggcattgaccgcgatcgccacgccgaga
atcaaaagctacgcgcgcgaggtattcaccgcatcgaccgagtcgaagtcgtttctgatg
gaagcgcttgccggtgtggaaaccatcaagggcatgggaatcgagcggccggtgcgcttg
cgctgggagaagaagtacgcgaaggcgctcgaagtgcagtaccgcgcgcacgccttcaat
attctggtcggccttggcagtcaattgctgaacgcggcaacgacgatcgcgattttgtgg
gtcggtgcaaatctggtgctggcgcgcgagatgacgatcggtcagttgatcgccttcaac
gcgttcatgggcagtgtgctgggtccgttgatggggctggtcggcttgtggagcatgttg
aacgatgcgggcgtggcgatggagcgcctgggcgacgtgctcgatatcgagcccgaacag
aagccgcaggatttgccgtcgcgcgtcatgctgcctgaattgcaaggcgagatcagcctg
agcggcgtctatttccgctacggcgacaacgactcgtcgtatgtgctcgaaaacatcagc
ttcgacatcaaacccggtgaactcgtggcgatcgttgggcgaagcggctccggcaaaacg
acgctcgccaagttgctggtcggcttctatacgccgagcgaaggcaagatgacgatcgac
ggctacgatctcggcgtggtcgacaaggcctattaccgcgcgcagatcggttacgtgatg
cagaacaatctgctgttctccggcacgatcgcggagaacatcgcgagcggcgacgacgcg
cccgagcggcgccgcatcgaggaagtcgcgaagatggccgacgcgcacgctttcatcagc
aagatgccgctcggctatgagcagattgtcggcgaacggggtattggactttccggcggg
cagatccagcggctgtgcattgcgcgcgcgctgtatcacgatccccgtctgctggttttc
gacgaggccacctccgcgctggattcgcagtcggaaagcaatattctcggcaacatgcac
gacattctgaagggccgaacggcggtgatcatcgcgcatcggctcagtacgatcatgcgc
gcggacaagattatcgtgctctatgaaggggctatcgtcgaacaggggcgtcacgacgaa
ctgattgcacgcggcggcatgtactaccaactggtccagaaacaactgagcgcgtga
DBGET
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