Paraburkholderia bryophila: NDK50_27235
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Entry
NDK50_27235 CDS
T08797
Symbol
rhaS
Name
(GenBank) rhamnose ABC transporter substrate-binding protein
KO
K10559
rhamnose transport system substrate-binding protein
Organism
pbry
Paraburkholderia bryophila
Pathway
pbry02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NDK50_27235 (rhaS)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pbry02000
]
NDK50_27235 (rhaS)
Transporters [BR:
pbry02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
NDK50_27235 (rhaS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
ThiN
Motif
Other DBs
NCBI-ProteinID:
WCM24502
LinkDB
All DBs
Position
2:1343968..1344975
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AA seq
335 aa
AA seq
DB search
MFKPLRHTGAAALCVALLAISCAASAADLKSGLKIAFVPKQINNPYEVTADNGGLAAIKE
FGGVGKVVGPSDAGASSQVQYINTLITQRQNAIVIAANDANAVVPYLKKAMSQGIKVVTF
DSDTAPEGRQLFVNQANAEGIGRSQVQLVSKLMGGEGEFAVLSATPNATNQNTWIKWMQE
ELKKPEYSKIKLVKIAYGNDDDQKSFTETQGLLQAYPNLKAIVAPTTVGIAAAARYISSS
SSKGKVAVTGLGTPNQMRAFVKNGTVKAFQLWDPNQLGYLAAYAAAALSSGTITGKEGES
FDAGKLGKRTIGPQGEIILGPPTTFDSSNIDNFNF
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaacctctacgtcacaccggcgcggccgcgctttgcgtcgcgttgctcgcgatc
agttgcgccgcgtccgccgcggatctgaaaagcggcctgaagatcgccttcgtgccgaag
cagatcaataacccctacgaagtgaccgccgacaacggcggcctcgccgcgatcaaggaa
ttcggcggcgtgggtaaggtggtgggaccgtcggatgcgggcgcgtcgtcgcaggtgcaa
tacatcaacacgttgatcacgcaacgacagaacgcgatcgtgatcgccgccaacgacgcg
aatgcggtggtgccgtatctgaagaaagccatgtcgcaaggcatcaaagttgtgaccttc
gactcggacacggcgcccgagggccgccagttgttcgtcaaccaggcaaacgcggaaggg
atcgggcgcagtcaggtccagctcgtttcgaaactgatgggcggcgagggcgagtttgcg
gtgctgtcggccacgccgaacgcgaccaatcagaacacctggatcaagtggatgcaggag
gagctgaagaagcccgagtactcgaaaatcaaactggtgaaaatcgcctacggcaacgac
gacgatcagaagtcgttcaccgagacgcagggcttgttgcaggcgtatccgaatctgaag
gcgattgtcgcgccgaccacggtgggtatcgcggcggcggcgcggtatatctcgtcgtcg
tcgagcaagggcaaggtcgcggtgacgggattgggcacgccgaaccagatgcgtgcgttc
gtgaagaacggcacggtgaaggcgttccagttgtgggacccgaaccagttgggctacctg
gcggcttatgccgcggcggcgttgtcgtcgggcacgatcacgggtaaggaaggcgagtcg
ttcgacgccggcaagctcggtaagcgcaccatcggaccgcaaggcgaaatcattctcgga
ccgccgaccacgttcgattcaagcaatatcgacaacttcaatttctga
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