Paraburkholderia bryophila: NDK50_27645 Help Entry NDK50_27645       CDS       T08797                                  Name (GenBank) DEAD/DEAH box helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism pbry  Paraburkholderia bryophila Brite KEGG Orthology (KO) [BR:pbry00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:pbry03400]     NDK50_27645 Enzymes [BR:pbry01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      NDK50_27645     5.6.2.6  RNA 3'-5' helicase      NDK50_27645 DNA repair and recombination proteins [BR:pbry03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     NDK50_27645 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WHD_Lhr DEAD WHD_4th_Lhr WHD_3rd_Lhr Helicase_C TrmB ResIII Cas3-like_C_2 WHD_DprA MarR_2 HTH_IclR Fe_dep_repress HTH_Crp_2 MarR GntR LexA_DNA_bind AAA_22 Motif Other DBs NCBI-ProteinID:  WCM24578 LinkDB All DBs Position 2:complement(1433653..1438155) Genome browser AA seq 1500 aa AA seqDB search MTSAKTKPTAALNAARPSKASRKAAGTASAKSITSTALTPFHPAVSNWFKKTFPAPTDAQ TAAWPPIRSGRSTLVAAPTGSGKTLTAFLSALDDLVQQGLAHGGALPDETLVVYISPLKA LSNDIRINLQSPLQGIAEELAALGLPPLDIRTAVRTGDTTQQERNALKKRAPHILVTTPE SLYVLLGSDSGRRMLATVRTVIVDEIHALAGSKRGSHLALSLERLDALCRRRLPRIGLSA TQKPVSAVARFLVGGASLASSEPADCAIIDVGHIRARDLALEIPPVPLEAVMSNEAWERV YDRLAELVAMHRTTLVFVNTRRMAERAARHLTERLGKDAVAAHHGSLAKEHRFDAEQRLK RGELRVLIATASLELGIDIGDVELVCQMGSPRAIAPFLQRVGRSGHQVGGMPKGRLFPAS RDDLIECAALLDCVQRGELDALRIPRAPLDVLAQQIVAEVSSAEWDEDALFDMMRRAAPY ADLEREQYDAVLRMLAEGYTSRNGPRGAYIHRDVVSGTLRGRRGGKLVAVTSGGTIPENA DYAVVLEPQAINIGTVNEDFAVESLAGDVFQLGNASYRILRIESGRVRVEDAQGQPPNIP FWLGEAPGRSDELSFGVARLREQIGHLLEAQTETDPATDPATGSETPPARLDHAIDWLID TLHLDEAAARQIVDYLARARAALGALPTQNTLVMERFFDESGGTQLVIHAPFGSRVNRAW GLALRKRFCRTFNFELQAAATEDAIVLSLTGSHSFALDEVWRYLHSNSAEHLLIQALLDA PLFGVRWRWNATTALGLPRYTGGRKTAPQLQRMRSEDLLTSVFPEQAACLENIVGERELP RHPLVDQTVDDCLHEAMDSDTWLALLRRMEQGEVRLVARDLPAPSPLAAEILTAKPYAYL DDAPIEERRTQAVMNRRWTDPASADDLGALDADAIDSVRDEAWPQTRNADEMHEALTGLA CITETEAQAHEGWPAWLAGLAGSGRATRLQVSDTVALWLPVERVTCFQALYPDVPAARYA PPLVAPKGYADTWTADDALLDVLRARLTGFGPLPVEAIAQALDLPAASVEQTLTRLEAEG YVMRGRFTPHADLEEWCERHLLARIHRYTVKRLRREIEPVERHDFMRFLFTWQHLTPDTR SEGRDALAAVLDQMEGFQAAAGAWEDEILPARVKAYANTSLDELCRAGKIVWTRLSERAR SGAGPIRSTPIVLLPRAQVRVWNALIDPSKQAALSARAQSVYDALARHGAMFFDELLSEV RVLRMELENALGELVAAGLVNSDSFAGLRALLKPVAKRNAFPSNRRARSSALIGGMDDAG RWALVSRPTAAAEPEPVPAIERRRQLPPDVLEHVAMTLLRRYGVVFWRLLEREADWLPPW RDLLRVLQRLEARGVIRGGRFVNGLAGEQFALPEAIPVLREVRRHANDGAFVCVAGTDPL NLAGTLLVGERVPAVAGNRVLYRDGVVIATLVAGTFWFAPIVDGNPVERERARGWLAKRL NT seq 4503 nt NT seq  +upstreamnt  +downstreamnt atgacttcggcaaagacaaagcccaccgccgcgctaaacgcggctcgcccatccaaagcg tcgcgcaaagcggcgggcacggcgtcggccaaatcaatcacgtccaccgccctaaccccc ttccaccccgccgtctccaactggttcaaaaaaaccttccccgcgcccaccgacgcccaa accgccgcgtggccgccaatccgcagcggccgctccacactggtcgccgccccgaccggc tccggcaaaaccctcaccgctttcctctcggcactcgacgacctggtccagcaaggcctc gcccatggcggcgccctgcccgacgaaacgctggtggtctacatctcgccgctgaaagcc ctgtccaacgacatccgcatcaacctgcaatccccattgcaaggcatcgccgaagaactc gccgcgctcggcctgccgccgctcgatatccgcaccgccgtgcgcaccggcgacaccacc cagcaggaacgcaacgcgctaaaaaagcgcgcgccgcatatcctggtgacgacacccgaa tcgctctacgtgctgctcggctccgactccggccgccgcatgctcgccaccgtgcgcacg gtgatcgtcgatgaaattcacgctctcgcgggcagcaagcgcggcagccatctcgcgctc agcctcgaacggctcgacgcgctgtgccggcgtcgcctgccgcggatcggcctgtcggcc acgcaaaagccggtcagcgcggtcgcgcgttttctcgtgggcggcgcaagcctcgcgagc agcgagcccgccgactgcgcgatcatcgatgtcggccatatccgcgcgcgcgacctcgcg ctggaaatcccacccgtgccgctcgaagcggtcatgtcgaacgaagcgtgggagcgcgtc tacgatcgtctcgccgaactggtggcgatgcaccgcaccacgctggttttcgtcaacacg cgccgcatggccgaacgcgcggcgcgtcatctgaccgagcggctgggcaaggacgcggtc gccgcgcatcacggcagcctcgcgaaagagcatcgcttcgacgccgagcagcgcctcaaa cgcggcgagttgcgcgtgctgatcgcgacggcatcgctggaactcggtatcgatatcggc gacgtcgaactggtctgccagatgggttcgccgcgcgcgatcgcgccgttcctgcaacgc gtcggacgttcgggccaccaggtcggcggcatgcccaaaggccggctgtttcccgcctcg cgcgacgatctgatcgaatgcgcggcgctgctcgactgcgtgcagcgcggcgaactcgac gcgctgcgaattccgcgcgcgccgctcgacgtgctcgcgcagcagatcgtcgccgaagtc tccagcgccgaatgggacgaagacgcattgttcgacatgatgcggcgcgccgcgccctac gcggacctcgaacgcgagcagtacgacgcagtgctgcgcatgctcgccgaaggctacacg agccgcaacggtccgcgcggcgcctatatccaccgcgacgtggtgagcggcacgctgcgc ggccggcgcggcggcaagctggtggccgtgacctcgggcggcacgattcccgagaatgcc gactacgcggtcgtgctcgaaccgcaggcgatcaacatcggcaccgtcaacgaagacttc gcggtcgaaagtctggccggcgacgtgtttcaactcggcaacgcgtcgtaccgcattctg cggatagagagcggccgcgtgcgggtcgaggacgcgcaaggccagccgccgaatattccg ttctggctcggcgaggcgccgggacgcagcgacgaactgtcgttcggcgtggcaaggttg agagaacagatcgggcatctgctcgaagcgcaaaccgaaaccgatccggcaaccgatcca gcaaccggatcggaaaccccacccgcacgcctcgaccacgcgatcgactggctcatcgac acgctgcatctcgacgaagccgccgcgcgtcagatcgtcgactatctcgcccgcgcccgc gccgcgctcggcgcgctgccgacgcaaaacacgctggtcatggaacgcttcttcgacgaa tccggcggcacccagctcgtgattcacgcgccgttcggcagccgcgtgaaccgcgcgtgg ggcctcgcgctgcgcaagcgtttttgccggaccttcaacttcgaactgcaggccgccgcc accgaagatgccatcgtcctgtcgctgaccggcagccactcgttcgcgctcgacgaagtg tggcgttatctgcattcgaacagcgccgagcacctgctgatccaggcgctgctcgacgcg ccgctgttcggcgtgcgctggcgctggaacgcgaccaccgcgctcggtttgccgcgttac accggcggccgcaaaaccgcgccgcaactgcagcgcatgcgcagcgaagacctgctcacg agcgtgtttccggagcaggcggcgtgtctggagaacatcgtcggcgagcgcgaactgccg cgccatccgctagtcgaccagaccgtcgacgactgtctgcacgaagccatggacagcgac acctggctggcgctgctgcgccgtatggaacagggcgaagtgcgcctggtggcgcgcgat ttgcccgcgccgtcgccgctggccgccgaaatcctgaccgcgaaaccgtacgcgtatctg gacgacgcgccgatcgaggagcgccgcacccaggcggtgatgaatcgccgctggaccgat cccgccagcgccgacgacctcggcgcgctcgacgccgacgcgatcgacagcgtgcgcgac gaagcctggccgcaaacgcgcaatgccgacgagatgcacgaagcgctcacgggcctcgcc tgcatcaccgagaccgaggcgcaggcgcacgaaggatggccggcgtggctcgccgggttg gccgggtccggccgcgcgacgcgcctgcaggtcagcgacacggtcgcgctatggctgccc gtcgagcgcgtcacctgcttccaggcgctctaccccgacgtcccggccgctcgctacgcg ccgccgctcgtcgcacccaaaggctacgccgacacctggaccgccgacgacgccctgctc gacgtcctgcgcgcgcgcctgaccggcttcggcccgctgcccgtcgaagcgatcgcccag gcgctggacctgccggcggcatcggtcgaacagacattgacgcgcctcgaagcggaaggc tacgtgatgcgcggccgcttcacgccccacgccgacctcgaagaatggtgcgagcgccat ctgctggcacgcatccaccgctacacggtgaaacgcttacgccgcgaaatcgagccggtg gaacggcacgacttcatgcgctttctgttcacctggcagcacctgacaccggacacgcgc agcgagggccgcgacgcgctcgccgcggtactcgaccagatggaaggcttccaggccgcc gcgggcgcatgggaagacgagatcctgccggctcgcgtgaaggcctatgcgaacacttcg ctcgacgaactatgccgcgccggcaagatcgtctggacccgtctgagcgagcgcgcgcgc agcggcgcgggaccgatccgaagcacgccgatcgtgctgttgccccgcgctcaggtgcgc gtgtggaacgcgttgatcgacccgtcgaagcaagcggcgttgtcggcgcgcgcgcaaagc gtctacgacgcgctggcgcggcacggcgcgatgttcttcgacgaactgctgtcggaagtc cgcgttttgcggatggaactggagaacgctttaggcgaactggtggccgccggcctcgtg aactcggacagtttcgcgggtctgcgcgcgttgctgaagcccgtggccaaacgcaatgcc ttccccagcaaccggcgcgcgcgatcgagcgcattgatcggaggaatggacgacgcgggc cgctgggcgctggtcagccgcccaacggccgctgccgagcccgagcccgtacccgcaatc gaacggcgcagacagttgccgcccgacgtgctcgagcatgtcgccatgacactgctgcgc cgctatggcgtcgtgttctggcgtctgctcgaacgcgaggccgactggttgccgccgtgg cgcgatctgctgcgcgtgctgcaacgcctcgaagcgcgcggcgtgattcgcggcggacgc ttcgtcaatggactggcgggcgaacagttcgcgttgccggaagcgattcccgtattgcga gaggttcgccgccatgcgaacgatggtgcttttgtgtgcgtcgccggcaccgatccgttg aatctggcgggcactttgctggtcggcgaacgcgtgcccgccgtggctggtaatcgcgtg ctgtatcgcgacggcgtggtgattgccacactcgtggcagggactttctggttcgcgccc atcgtggacggcaatcccgtcgaacgggaacgggcacgcggctggctggcaaaaagactc tag

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