Paraburkholderia bryophila: NDK50_27840
Help
Entry
NDK50_27840 CDS
T08797
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pbry
Paraburkholderia bryophila
Pathway
pbry03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NDK50_27840
09124 Replication and repair
03420 Nucleotide excision repair
NDK50_27840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbry03021
]
NDK50_27840
03036 Chromosome and associated proteins [BR:
pbry03036
]
NDK50_27840
03400 DNA repair and recombination proteins [BR:
pbry03400
]
NDK50_27840
Enzymes [BR:
pbry01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
NDK50_27840
Transcription machinery [BR:
pbry03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
NDK50_27840
Chromosome and associated proteins [BR:
pbry03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
NDK50_27840
DNA repair and recombination proteins [BR:
pbry03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
NDK50_27840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
ResIII
GlgS
Motif
Other DBs
NCBI-ProteinID:
WCM24615
LinkDB
All DBs
Position
2:1480281..1482548
Genome browser
AA seq
755 aa
AA seq
DB search
MTYVVAVRAMCEFTAKRGDLDLRFTPAPTSLEGMAGHVAVTGRRASGYETEITLTGTHRG
LTVRGRADGFYPLANRLEEIKTYRGDLARMPDNHRTLHWAQALVYGHLLCRARGLAALTV
ALVYFDIGTQKETLLEEFHTARDLEVFFVEQCERFLDWAVQEEAHRAARNAALGALQFPH
GQFRSGQRELAVSVYRAARDGKPLMAQAPTGIGKTLATIFPLLKACAEDQIERIFFLTAK
TPGRALALDAIDTLHRSAGSALPLRTLELVARDKACEHPDKACNGESCPLARGFYDRLDA
ARGAALAGPKLDRAALREVALAHEVCPYYLAQELARWADVVVGDYNYYYDSSAMLYALTQ
INQWRVGVLVDEAHNLLDRARRMYTASLDQAALRLARKTAPAALRKPLERLQREWNALKR
AQGETYQVYGEVPSKLLFAAQKLIGEVTDQIADAPLSIDEASLRFFFDAMHFVALAEQFG
EHSIFDITLSADRFAPRDKTAATLCVRNVIPAPFLAPRYAAARTTVLFSGTLNPYHFYRD
TLGLPESTSWLDVEGPFRAEQLQVRVAGNVSTRWRDRERSLLPIVDLIARQYAGQPGNYL
GFLSSFDYLRRVVELMRERHPDVPVWAQEPGMDEAARDAFLARFRTHHEGVGFAVLGGAF
SEGVDLVGQQLIGAFIATLGLPQVNDVNEQMRRTMDAKFGSGYDYMYLYPGLQKVVQAAG
RVIRTERDRGVVHLIDDRYRRAEVRRLLPRWWQVD
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgacctacgtcgtcgccgtgcgggccatgtgcgaattcaccgcgaagcgcggcgatctg
gacctgcgcttcacgcccgcgccgacatcgctcgaaggcatggcgggccatgtcgccgtg
accggccgtcgcgcgagcggttacgaaaccgagatcacgctgaccggcacgcatcgcggg
ctgaccgtgcgcggccgcgccgacggtttctacccgctcgcgaaccggctcgaagagatc
aagacatatcgcggcgacctcgcgcgaatgcccgacaatcaccgcacgctgcattgggca
caggcgctggtgtacgggcatctgctgtgccgcgcgcgcgggcttgccgcgctgacggtt
gcgttggtgtacttcgacatcggcacgcagaaagagacgctgctggaggagtttcacacc
gcgcgcgatctggaggttttcttcgtcgaacaatgcgagcggttcctcgattgggccgtg
caggaagaggcgcatcgcgccgcgcgcaacgccgcactcggcgcgttgcagtttccgcac
gggcaatttcgcagcggccaacgtgagctggcggtgtcggtctatcgcgccgcgcgcgat
ggcaaaccgctgatggcgcaagcgcccaccggcatcggcaagacgctggcgacgattttt
ccgctgctgaaagcgtgcgcggaagatcagatcgagcgcatctttttcctcaccgcgaaa
acgccgggccgcgcgctcgcgctcgatgccatcgacacattgcatcgcagtgccggttcg
gcgttgccgttgcgaaccctcgaactggtcgcacgcgacaaagcctgcgagcatcccgac
aaagcctgcaacggcgagtcgtgcccgctcgcgcggggcttttacgaccggctcgacgcg
gcgcgcggcgcggcgctggccggcccgaaactcgatcgcgcggcgctgcgcgaagtcgcg
ctcgcgcacgaggtctgcccgtactatctggcgcaggagctggcacgctgggccgacgtg
gtggtcggcgattacaactactactacgacagcagcgccatgttgtacgcgctcacgcag
atcaaccaatggcgcgtcggcgtgctggtggacgaggcacacaacctgctcgaccgggcg
cgccgcatgtacaccgcgtcgctcgatcaggcggcgttgcggctcgcccgcaaaaccgca
ccggccgcgttgcgcaagccgctggagcgcttgcagcgcgagtggaacgcgctcaagcgt
gcgcagggcgagacgtatcaggtctacggtgaggttcccagcaagctgctgttcgccgcg
caaaaactgatcggcgaggtgaccgatcaaatcgccgacgcgccgctttccatcgacgaa
gcctcgctgcggtttttcttcgacgccatgcatttcgtcgcgctggccgagcagttcggc
gagcattccattttcgacatcacgctcagcgccgatcgtttcgcgccgcgcgataagacc
gctgccacgctatgcgtgcgcaacgtgattccggcgccgtttcttgcgccgcgctatgcc
gccgcacgcaccacggtgctgttctccggcacgctgaatccctatcacttctatcgcgac
acgctgggtttgcctgagtcgacctcatggctcgacgtcgagggaccgtttcgcgcggag
caattgcaggtgcgcgtggccggcaacgtgtcgacgcgctggcgcgatcgcgagcgttct
ctcttgccgatcgtcgatctgatcgcgcggcagtacgcggggcagcccggtaattatctg
ggctttctgagcagcttcgactatctgcggcgcgtggtcgaactgatgcgcgaacggcat
cccgacgtgccggtctgggcgcaggagcccggcatggacgaagccgcgcgcgacgcgttt
ctcgcgcgctttcgcacccaccacgagggcgtcggcttcgcggtgctgggcggagcgttt
tcggaaggcgtcgatctggtcggccagcagttgatcggcgcgtttatcgcgacgctcggc
ctgccgcaagtcaacgacgtcaacgagcagatgcgccgcacgatggacgcgaagttcggc
agcggctacgactacatgtatctgtatccgggcttgcagaaggtggtgcaggcggcgggg
cgcgtgatccgcacggagcgggatcggggcgtggtgcatctgatcgacgaccgctaccgg
cgtgcggaggtgcggcgcttactgccgcgctggtggcaggtggattga
DBGET
integrated database retrieval system
