Paraburkholderia bryophila: NDK50_27975
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Entry
NDK50_27975 CDS
T08797
Symbol
prpR
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
pbry
Paraburkholderia bryophila
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbry03000
]
NDK50_27975 (prpR)
Transcription factors [BR:
pbry03000
]
Prokaryotic type
Helix-turn-helix
Other families
NDK50_27975 (prpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
PAS_8
AAA
PAS_4
AAA_2
AAA_3
PAS
HTH_23
PAS_7
AAA_16
HTH_Tnp_ISL3
TIP49
PAS_9
AAA_7
Motif
Other DBs
NCBI-ProteinID:
WCM24640
LinkDB
All DBs
Position
2:1513151..1515175
Genome browser
AA seq
674 aa
AA seq
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MSTFTSSLAVPQAGRPGVALVSISRLQSLCETVAPRYAARARFFSVREGYGAAVTALQAY
VDAGAVDVVLAAGSNGAYLRDNLNVPVVMVKVNGFDVLSAITRATTTWPGARIGLVLHET
ISHELADLGAWLKVDLKQRAYRSIDEVRLAVANLAAEGCSVIIGPGMACDVAQQSGLASV
FLYSLGAVEEAFERSVELARVSRQKEAKRERLNTIVGHLRDGVAAFDEAGQLEAVNPAML
DLLGFEAPKELLLAGRERDVAAQVSQAVGPLLREMLEQGQPIEERVEQIGSRALIVNCVP
VVEQGMRSGSVVTLQDALVAQRIDRSLRTSQRPKQLVARHHLGDLVGDSAALERVRRLAR
AGAAHDATVLLAGESGTGKELVAQGIHNASRRRGNPFVAFNCAALPEGLIESELFGHEEG
AFTGARRGGKPGLFEIAHTGTIFLDEIGEMPAALQSRLLRVLQEREVMKLGAGRATPVDV
RVIAATHRDLHALVEQGAFRADLYFRLNLLPIELPPLRARRGDIAQLARHLLSRSALQYG
LSDAALDRVLAFLAPLFDGYAWPGNVRELENLLARAAIYLGDATMAATAGMAASPGPGGE
DWQAVFPEFGRMRRTAAADLVQRDPQSSADKASARAAPTREDVMRALDESGGNRAAASRA
LGIGRTTLWRLMKG
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
gtgtccactttcacatcgtcgctggcggtgcctcaggcgggccggccgggcgtcgcactg
gtgagtatcagccggttgcagtcgctttgcgagaccgtcgcaccgcgttacgccgcgcgc
gcgcggttcttttcggtgcgcgagggctacggcgcagccgtcacggccttgcaggcttac
gtggatgcgggcgctgtcgacgtcgtgctggccgccggatcgaacggcgcctatctgcgc
gacaacctgaacgtgccggtcgtcatggtcaaggtgaacggcttcgacgtgctgagcgcg
atcacccgcgccaccaccacgtggcccggcgcgcggatcggcctggtgctgcacgaaacg
atctcgcacgaactggccgacctcggcgcgtggctgaaagtcgacctgaagcaacgcgcc
taccggtcgatcgacgaagtgcggctcgccgtcgccaatctggccgccgagggctgcagt
gtgatcatcggccccggcatggcctgcgacgtcgcgcagcagtcgggtctcgccagcgtg
tttctgtactcgctcggcgccgtcgaggaagcgttcgagcggtcggtggaactggcgcgc
gtgagccggcagaaggaagcgaagcgcgagcggctgaataccatcgtcggtcatctgcgt
gacggggtggccgccttcgacgaagccggccagctcgaagcggtcaacccggccatgctc
gatctgctgggcttcgaggccccgaaagagctgctgctggccggccgcgaacgggacgtg
gcggcgcaggtctcgcaggccgtcgggccgctgctgcgcgaaatgctcgaacagggccag
ccgatcgaggagcgtgtcgagcagatcggcagccgggcgctgatcgtgaactgtgtgccg
gtggtggagcagggcatgcgctccggctcggtcgtgactttgcaggatgcgctggtcgca
caacggatcgaccgttcgctgcgcaccagccagcggccgaagcaactggtcgcgcggcat
catctgggcgatctggtcggcgattcggcggcgcttgaacgggtgcggcggctggcccgc
gcgggcgcggcgcacgatgccaccgtgctgctcgccggcgaaagcggcaccggcaaggaa
ctggttgcgcagggcattcacaacgcgagccggcggcgcggcaatccgttcgtcgcgttc
aattgcgcggccttgcccgaagggttgatcgaaagcgaactgtttgggcacgaggagggt
gcgtttaccggcgcgcgtcgcggcggcaaaccgggcctgttcgaaatcgcgcataccggc
actattttcctcgacgaaatcggcgaaatgcccgcggcgctgcaaagccggctgctgcgc
gtgctgcaggagcgcgaggtgatgaaactgggcgccgggcgcgccacgccggtcgacgtg
cgggtgattgccgcgacgcatcgcgatctgcatgcgctggtcgagcagggcgcctttcgc
gcggatctgtactttcgactcaacctgcttccgatagaattgccgccgctgcgcgcacgg
cgcggcgatatcgcccaactggcgcggcacttgttaagccgcagcgcgctccaatatggc
ttgtcggacgccgcgctggaccgggtgctggcctttctcgcaccgttgttcgatggctac
gcgtggcctggcaatgtgcgggagctggaaaatctgctggcgcgtgcggcgatttatctg
ggcgatgccacgatggcggctacggccggcatggccgcgtcgccggggccgggcggcgag
gattggcaagcagtcttccccgaattcgggcggatgaggcggacggccgcagcggatctt
gttcagcgcgatcctcaatccagcgccgacaaggcttcggcccgcgccgcgcccacccgc
gaagacgtcatgcgcgccctcgacgaatcgggcggcaaccgcgccgcggcaagccgggcg
ctgggcatcggccgaaccacgctctggcgtttgatgaaaggctga
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