Paraburkholderia bryophila: NDK50_28885
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Entry
NDK50_28885 CDS
T08797
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pbry
Paraburkholderia bryophila
Pathway
pbry03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NDK50_28885 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbry03019
]
NDK50_28885 (groL)
03110 Chaperones and folding catalysts [BR:
pbry03110
]
NDK50_28885 (groL)
03029 Mitochondrial biogenesis [BR:
pbry03029
]
NDK50_28885 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pbry04147
]
NDK50_28885 (groL)
Enzymes [BR:
pbry01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
NDK50_28885 (groL)
Messenger RNA biogenesis [BR:
pbry03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
NDK50_28885 (groL)
Chaperones and folding catalysts [BR:
pbry03110
]
Heat shock proteins
HSP60 / Chaperonin
NDK50_28885 (groL)
Mitochondrial biogenesis [BR:
pbry03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
NDK50_28885 (groL)
Exosome [BR:
pbry04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NDK50_28885 (groL)
Exosomal proteins of other body fluids (saliva and urine)
NDK50_28885 (groL)
Exosomal proteins of breast cancer cells
NDK50_28885 (groL)
Exosomal proteins of colorectal cancer cells
NDK50_28885 (groL)
Exosomal proteins of bladder cancer cells
NDK50_28885 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
WCM24798
LinkDB
All DBs
Position
2:complement(1719245..1720885)
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKEIIFSDVARSKLVEGVNILANAVKVTLGPKGRNVVLERSFGSPVVTKDGVSVAREI
ELQDRVQNIGAQLVKEVASRTSDAAGDGTTTATVLAQAIVREGQKYVAAGLNPLDLKRGI
DKAVVAAIDELKKISKPTTTSKEIAQVATISANGEESIGQRIAEAIDRVGKEGVITVEDG
KSLDDELDVVEGLQFDRGYLSPYFINDQDKQVAVLDNPYILLHDKKVSNIRDLLPVLEQV
AKAGRPLLIIAEDVEGEALATLVVNNLRGILKTVAVKAPGFGDRRKALLEDIAILTGGQV
IAEETGLSLEKATLAELGQAKRIEVGKENTTVIDGAGDGKNIEARVKQIRTQIEEASSDY
DREKLQERVAKLAGGVAVIKVGGATEIEVKEKKDRVDDALHATRAAVEEGIVPGGGVALI
RVKKAIGGLKGANADQDAGIKIVLRALEEPLRQIVTNAGDEASVVVARVAEGSGNFGYNA
QTGEYGDLVESGVLDPTKVTRTALQNAASVASLLLTTDATVHEAPKAAAPAAPAGGPGAG
GPGFDF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagaaattatttttagcgatgtggcgcgttcgaaactggtcgaaggcgtg
aacattctcgccaacgcggtcaaggtgacgctcgggccgaaggggcgcaacgtcgtgctg
gagcgtagcttcggctcgccggtcgtgaccaaggacggcgtttcggtcgccagggaaatc
gagttgcaggaccgcgtgcagaacatcggcgcgcaactggtgaaggaagtcgcctcgcgc
accagcgacgccgccggcgacggcaccaccaccgcgacggtgctcgcccaggcgatcgtg
cgtgaaggacagaagtatgtcgcggccggcctgaatccgctcgatctgaagcgcggcatc
gacaaggcggtcgtggccgccatcgacgaattgaagaagatcagcaagccgaccaccacc
agcaaggaaatcgcccaggtcgcgacgatctcggcgaacggcgaggagtcgatcggtcag
cggatcgcggaagcgatcgaccgggtcggcaaggaaggcgtgatcacggtggaagacggc
aagtcgctcgacgacgaactggacgtggtggaaggcctgcaattcgatcggggctacctg
tcgccgtatttcatcaacgatcaggacaagcaggtcgcggtgctcgacaacccgtatatc
ctgctgcacgacaagaaggtctcgaacattcgcgatctgctgccggtgctggaacaggtc
gccaaggcgggccggccgctgctgatcatcgcggaagacgtggaaggcgaagcgctcgcc
acgctggtcgtgaacaatttgcgcggcattctcaagaccgtggccgtcaaggcgccgggc
ttcggcgaccgccgcaaggcgctgctggaagacatcgcgattctgaccggcggccaggtg
atcgccgaggaaaccggcctgtcgctggaaaaagccacgctcgccgaactgggtcaggcc
aagcggatcgaggtcggcaaggaaaacaccacggtgatcgacggcgccggcgacggtaag
aacatcgaggcgcgcgtgaagcagattcgcacgcagatcgaagaggcgagctcggactac
gaccgcgagaaactgcaggaacgggtcgcgaaactggcgggcggcgtggccgtgatcaag
gtgggcggcgccacggaaatcgaggtcaaggagaagaaagaccgcgtcgacgacgcgctg
cacgccacgcgcgcggccgttgaggaaggcatcgtgccgggcggcggcgtcgcgttgatc
cgcgtgaaaaaagcgatcggcggcctcaaaggcgcgaacgcggatcaggacgccggtatc
aagatcgtgctgcgtgcgctggaagaaccgctgcgtcagatcgtgacgaatgcgggcgat
gaggccagcgtggtggtcgcaagagtcgcggaaggcagcggcaatttcggctacaacgcg
caaaccggcgagtacggcgatctggtcgaatccggcgtgctcgatccgaccaaggtcact
cgcacggcgctgcaaaacgcggcttccgtcgcctcgttgctgctgacaaccgacgcgacc
gtgcacgaagcgcccaaagcagcggcgcctgccgcgccggcgggtggaccgggtgcgggt
gggccgggcttcgatttctaa
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