Paraburkholderia bryophila: NDK50_29215
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Entry
NDK50_29215 CDS
T08797
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pbry
Paraburkholderia bryophila
Pathway
pbry00260
Glycine, serine and threonine metabolism
pbry00460
Cyanoamino acid metabolism
pbry00630
Glyoxylate and dicarboxylate metabolism
pbry00670
One carbon pool by folate
pbry00680
Methane metabolism
pbry01100
Metabolic pathways
pbry01110
Biosynthesis of secondary metabolites
pbry01120
Microbial metabolism in diverse environments
pbry01200
Carbon metabolism
pbry01230
Biosynthesis of amino acids
pbry01240
Biosynthesis of cofactors
pbry04981
Folate transport and metabolism
Module
pbry_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NDK50_29215
09102 Energy metabolism
00680 Methane metabolism
NDK50_29215
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NDK50_29215
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
NDK50_29215
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NDK50_29215
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
NDK50_29215
Enzymes [BR:
pbry01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
NDK50_29215
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GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Beta_elim_lyase
YfbR-like
Motif
Other DBs
NCBI-ProteinID:
WCM22111
LinkDB
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Position
2:complement(1798257..1799531)
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AA seq
424 aa
AA seq
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MSNPNPFFEEPLAARDAAVRGAILKELERQQSQVELIASENIVSRAVLEAQGSVLTNKYA
EGYPGKRYYGGCEYADVIETLALDRIKQLFNAKFANVQPHSGAQANGAVMLALVKPGDTV
LGMSLDAGGHLTHGAKPAMSGKWFNAVQYGVKRESMLIDYEQIEELAQQHKPALLIGGFS
AYPRELDFARLRKIADGVGAKLMVDMAHIAGVIAAGRHQNPVDHAHVVTSTTHKTLRGPR
GGFVLTNDEDIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALQPGFKTYIDNVLANAKA
LGEVLKEGGVDLVTGGTDNHLLLVDLRPKGLKGNQVEQALERAGITCNKNGIPFDAEKPT
VTSGIRLGTPAGTTRGFGVSEFREVGRLIVEVFDALRDHPEGHAVTEQRVRREIFALCER
FPIY
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacccgaatcccttcttcgaagaaccgctggctgcccgcgacgcggccgtgcgc
ggcgctattctgaaagaactcgagcgccagcagtcgcaggtcgaactgatcgcgtcggaa
aacatcgtgtcgcgcgcggtgctcgaagcgcagggctcggtgctgaccaacaagtacgcg
gaagggtatccgggcaagcgttactacggcggttgcgaatacgcggacgtgatcgaaacg
ctggcgctcgatcgtatcaagcagttgttcaacgcgaaattcgccaacgtgcagccgcat
tccggcgcgcaggccaacggcgcggtgatgctggcgctggtcaagcccggcgacacggtg
ctcggcatgtcgctcgacgcgggcggccatctgacgcacggcgccaaaccggcgatgtcg
ggcaaatggttcaacgcggtgcagtacggcgtgaagcgcgagtcgatgttgatcgactac
gagcagatcgaagaactcgcgcagcagcacaaaccggcgctgttgatcggcggcttctcg
gcttacccgcgtgaactggacttcgcccgtctgcgcaagatcgccgacggcgtcggcgcg
aagctgatggtggatatggcgcacattgccggcgtgatcgcggcgggccgtcaccagaat
ccggtcgaccacgcgcatgtggtcacgtccaccacgcacaagaccttacgcggtccacgc
ggcgggtttgttctgacgaacgacgaagacatcgcgaagaaaatcaattcggcggtgttc
cccggcttgcaaggcggtccgctgatgcatgtgatcgccggcaaggcggtcgcgttcggc
gaggcgctgcaaccgggtttcaagacctatatcgacaacgtgctcgccaatgcgaaggcg
ctcggcgaagtgctgaaggaaggcggcgtcgacctcgtaactggtggcacggacaaccat
ctgctgctggtcgatcttcggccgaagggcctgaagggcaatcaggtggagcaggcgctg
gaacgcgcgggcatcacctgcaacaagaacggcattccgttcgacgccgagaagcccacg
gtcacctccggcattcgcctcggcacgccggcgggcaccacgcgcggcttcggcgtgagc
gagttccgcgaagtggggcgcctgatcgtcgaggtgttcgacgctctgcgcgatcacccc
gaaggccatgccgtcaccgaacaacgcgtgcgccgcgagattttcgcgctgtgcgaacgc
tttcccatctactga
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