Paraburkholderia bryophila: NDK50_31980
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Entry
NDK50_31980 CDS
T08797
Symbol
glgX
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
pbry
Paraburkholderia bryophila
Pathway
pbry00500
Starch and sucrose metabolism
pbry01100
Metabolic pathways
pbry01110
Biosynthesis of secondary metabolites
Module
pbry_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
NDK50_31980 (glgX)
Enzymes [BR:
pbry01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
NDK50_31980 (glgX)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
GlgX_C
DUF3459
pulA_all-beta
Motif
Other DBs
NCBI-ProteinID:
WCM22616
LinkDB
All DBs
Position
2:2465086..2467206
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AA seq
706 aa
AA seq
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MSTAREQIIELTTELTIGVPYPLGAHWDGRGVNFALVAPHAHAVEVCLFDAEGHSELARL
ALPGNEHGVWHGYLEGGEPGLVYGYRVDGPYAPQHGHRFNPNKVLLDPYARLVVGQYLGQ
DGFNGHDASNARQPDSHDNAAIALKARVVHEPYDWRGDTPPRVPLAETILYEVHPKGLTQ
RHPHVAARLRGKYAGIGSTAMLDHLQALGVTTVSLLPVHHRADETRLQRAQLSNYWGYSS
IAFFAPETRYWSGRPGSTPISEFRDMVRALHTRHIEVILDVVYNHTAETDEHGPTLSFRG
IDNALYYRLRADDAALYENWTGCGNCLNLAEPRVLQLVMDSLRYWVEEMHVDGFRFDLAP
VLARGEQSFSATAAFLTAVRQDPVLARVKLIAEPWDIGPDGYLLGRFPAGWLEWNDRYRD
TMRAFWLHQERSLGDFARCFAASSDCFRHDTRLPAASVNFIAAHDGFTLRDLVSYNHKHN
DANGEHNRDGHHHNHSWNCGVEGETTDRGVLRLRILLQRALLATLFFSQGTPMLLAGDEI
GRTQRGNNNAYGQDNAVSWLDWVDADFELAAYTARLIALRKRYPALRHAHWYDGAPQADG
HPDIAWLTPDGHALTVAEWEARHRCCIGIRLGAAGDEPCLLLFNAKAHAVDFTLPHGAWR
VLLDSSDPAIEPYLAGVCLAVPAHGVLMAVLSADAASSRHTPAGIG
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgcacgcgaacagataatcgaactaacaaccgaactaacaatcggagtgccc
tatccgcttggcgcgcactgggacggccgcggcgtgaatttcgcgctggtggcgccgcat
gcgcacgcggtcgaggtgtgtctgttcgatgccgaaggtcacagcgaactggcccgtctg
gccctgccaggcaatgagcacggcgtctggcacggctacctcgaaggcggcgaacccggg
ctggtttacggctaccgcgtcgacggtccgtacgcgccgcagcacggccaccgtttcaat
ccaaacaaagtgctgctcgatccctacgcgcggctggtggtcgggcagtatctcggccag
gacggcttcaacggccacgacgcgagcaatgcgcggcaacccgattcgcacgacaacgcg
gccatcgcgctcaaggcgcgtgtcgttcacgagccttacgactggcgtggcgatacgccg
ccgcgcgtgccgctcgccgagacgatcctgtacgaggtccatccgaaaggattgacgcaa
cggcatccccatgttgccgcgcgtttgcgcggcaagtacgcgggtatcggcagtaccgcg
atgctcgaccatctgcaggcactcggcgtcacgaccgtgagtttgttgccggtccatcac
cgtgcggacgaaacgcggctgcaacgcgcgcaactgagcaattactggggctattcgagt
atcgcgttcttcgcgcctgaaacgcgctactggtccggccgtcccggcagcacaccgatc
agcgagtttcgcgacatggtgcgcgcgttgcacacccggcatatcgaggtcatcctggac
gtggtgtacaaccacacggccgaaaccgacgaacacggcccgaccctgagttttcgcggc
atcgacaacgcgctctactaccggttgcgtgcggacgatgccgccctgtacgaaaactgg
accggttgcggcaactgcctcaatctcgccgaaccgcgcgtattgcaactggtgatggac
tcgctgcggtactgggtcgaggagatgcacgtcgacggtttccgcttcgatctggcgccg
gtgctggcgcgcggtgagcagagtttctccgccaccgcggcgtttctgaccgcggtccgc
caggacccggtgctggcgcgcgtcaagctgatcgccgaaccgtgggacatcggcccggac
ggctatctgctcggccgcttccccgccggctggctcgaatggaacgatcgataccgtgac
accatgcgcgcgttctggctgcaccaggaacgctcgctgggcgacttcgcgcgctgcttc
gcggcgtccagcgactgcttccggcacgacacgcgtttgccggctgccagcgtcaacttc
atcgcggcgcacgacggtttcacgctgcgcgacctggtcagctacaaccacaaacataac
gacgccaacggcgaacacaaccgcgacggacatcaccacaaccatagctggaattgcggc
gtggaaggcgaaacgacggatcgcggcgtgttgcgcctgcgaattcttctgcaacgcgcg
ctgctcgccacgctgttcttttcgcagggcacgcccatgctgctcgccggcgatgagatc
ggccgcacgcaacgcggcaataacaacgcgtatggccaggacaacgcggtgtcgtggctc
gactgggtcgacgccgatttcgagctggccgcatacacggcccgtctgattgcgctcaga
aaacgctatccggcactgcgtcacgcgcactggtacgacggcgcgccgcaagccgacggt
catcccgacatcgcctggctgacgcccgacggccatgcgctcaccgtcgcggagtgggag
gcccgtcaccgctgctgcatcggcatccgcctcggcgccgccggcgacgaaccctgcctg
ctgctgttcaacgcgaaagcgcacgcggtcgacttcacgctgcctcacggagcatggcgc
gtgctgctcgacagcagcgatcccgctatcgaaccctaccttgccggcgtttgtctcgcg
gtgcccgcgcacggcgtgctgatggcggttttatcggccgacgccgcaagttcccgacat
acgccggcaggcatcggctga
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