Paraburkholderia bryophila: NDK50_33720
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Entry
NDK50_33720 CDS
T08797
Name
(GenBank) LysR family transcriptional regulator
KO
K21757
LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
Organism
pbry
Paraburkholderia bryophila
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbry03000
]
NDK50_33720
Transcription factors [BR:
pbry03000
]
Prokaryotic type
Helix-turn-helix
LysR family
NDK50_33720
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_20
Motif
Other DBs
NCBI-ProteinID:
WCM22938
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Position
2:2852326..2853225
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AA seq
299 aa
AA seq
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MNLRALQCFVILAEELNFSRAAERLHIAQPALSQQIRSLEERLGTQLVDRARRPLVLTEA
GHYLCSEARQILGSVEQVTRAAQEIGVGRRGWLSVGFTRSSMYSVLPPALNAFHRAYPQV
ELKLFEMLTEEQTDALRDLRIHIGIGRQPVAVEGCTSYPLMRERVMAALEPNHPLAAHKS
VQIAELADTPLILYPKHQNAQFKRSVLSLYRDAGVTPFVAHEAYEIQTAIALVAAGLGVT
FIGESVARHGRHDVVFRHLAGPGSSYRSTLAATFRTDDASPHLRAFLDCLPAPLADAAL
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttagggccctgcagtgctttgtgattcttgccgaggaactcaatttcagccgt
gccgccgagcgcctgcatatcgcgcaaccggcgctgagccagcagatccgttcactcgag
gaacggctcggcacgcaactggtggatcgggcgagacgcccgctggtgttgaccgaggcg
ggccattatttgtgtagcgaagcgcggcagattctcggctcggtggaacaggtgacgcgc
gcggcgcaggaaatcggcgtgggccggcgcggctggctcagcgtcggcttcacccgctcg
tcgatgtatagcgtgctgccgcccgcgctcaacgcgtttcatcgcgcgtacccgcaggtc
gagctgaaactgttcgaaatgctcaccgaagaacagaccgatgcgctgcgcgatctgcgc
attcatatcggcatcggccggcagcccgttgccgtggaaggctgcacgtcgtatccgctg
atgcgcgaacgcgtgatggccgcgctcgaaccgaatcatccacttgccgcgcacaagagc
gtgcagatcgcggagctcgccgacacaccgctgattctgtatccgaagcaccagaacgcg
cagttcaaacgctcggtgctatcgctgtatcgcgatgcgggcgtgacgcctttcgtcgcg
cacgaggcgtatgaaattcaaaccgccatcgcgctggtggccgccggcctcggcgtcacg
ttcatcggcgaatcggtggcgcggcatgggcgtcatgacgtcgtgttccgtcatctcgcg
ggaccgggttcgtcgtatcgttcgaccctcgcggccactttccgcaccgacgatgcatcg
ccgcacctgcgtgcgtttctcgactgcctgccggcgcccctcgccgacgcggcactataa
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