Paraburkholderia bryophila: NDK50_35150
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Entry
NDK50_35150 CDS
T08797
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
pbry
Paraburkholderia bryophila
Pathway
pbry03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NDK50_35150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbry03400
]
NDK50_35150
Enzymes [BR:
pbry01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
NDK50_35150
DNA repair and recombination proteins [BR:
pbry03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
NDK50_35150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Motif
Other DBs
NCBI-ProteinID:
WCM23189
LinkDB
All DBs
Position
2:complement(3178972..3179280)
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AA seq
102 aa
AA seq
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MAKTASKEAAAAPAEGVDTTPLPENYEAAQAELEGLVARMEGGNLSLEESLTAYRRGAAL
VAFCQQQLEKVEQQVRVLDGETLKPLPMNSAGTAATESGDDL
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaccgcatcgaaagaggctgctgctgccccggctgaaggcgtcgacaccacg
ccgctgcccgagaactacgaggccgcccaagccgagctggaagggctggtggcgcgcatg
gaaggcggcaatctcagcctcgaggagtcgctgaccgcctaccggcgcggcgcggcgctc
gtggcgttttgtcagcagcagctcgaaaaggtcgagcagcaggtgcgcgtgctcgacggt
gagacgcttaaaccgctgcccatgaatagcgcaggcacagccgctactgagagcggggac
gacctatga
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