Paraburkholderia bryophila: NDK50_35230
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Entry
NDK50_35230 CDS
T08797
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pbry
Paraburkholderia bryophila
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbry03400
]
NDK50_35230
Enzymes [BR:
pbry01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
NDK50_35230
DNA repair and recombination proteins [BR:
pbry03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
NDK50_35230
Prokaryotic type
NDK50_35230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WCM23205
LinkDB
All DBs
Position
2:3195763..3197262
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AA seq
499 aa
AA seq
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MTRVRRLNDSFETGLVWFRRDLRGTDNAALYYALRHCERVWCVFVFDTTILQPLVDAWQA
RHPDTPVQDRRIEFILATLGELDEALRAEGGGLIVLYGDPAELVPKLADQLGVEAVFANH
DYEPVAIARDEAVQERLADAGRQLLTFKDQVIFERDEVLTGQKKPFTVFTPYKNAWLKQL
TAFDLKPYPVETYAKHLAAAPARLNRQLPTLEQLGFAPSNLAELALPTGMSGAQQLLDDF
MTRIDSYADRRDFPASKGPSYLSMHLRFGTVSIRTLARLAHEMSLQPDGQGSATWLSELI
WRDFYFMILAHHPRLASGASFKEEYDRLRWEQGPEADEAFSAWCDGRTGYPLVDAAMLQL
NRTGYMHNRLRMVTASFLVKDLGVDWRLGERYFAEQLNDFDFSANNGGWQWAASTGCDAQ
PYFRIFNPITQSEKFDAEGRFIKRYLPELAKLPPKWIHAPWLAGVERLADLGVVLGKDYP
APIVDHAQARARTLARFGK
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgacacgcgtccgacgactgaacgactccttcgaaaccggtctggtctggttccgccgc
gacctgcgtggcacggacaacgccgcgctttactacgcgctcagacattgcgagcgtgtg
tggtgcgtgttcgtgttcgacacgacgatcctccagccgctagtcgacgcctggcaggcg
cgtcatccggatacacccgtgcaggaccgccgcatcgagttcattctggcgacgctgggc
gaactggacgaggcgttgcgcgccgagggtggcggcctgatcgtgctgtacggtgatccg
gccgaactggtgccgaaactggccgaccagctcggtgtcgaggcggtattcgcgaatcac
gattacgagcccgtggcaatcgcgcgcgacgaagcggtgcaggagcgtctcgccgacgcc
ggacgccaattgctgaccttcaaggaccaggtgatcttcgagcgcgacgaggtgctgacg
ggccagaagaaaccgttcaccgtgttcacgccatacaagaacgcgtggctcaagcaattg
acggcgttcgatctgaagccgtatccggtggaaacgtacgcgaaacatctggccgcggcg
ccagccaggctgaatcggcaattgccgactcttgagcagttgggtttcgcgccgagcaat
ctcgcagaactggcactgcccaccggcatgagcggcgcgcagcagctactcgacgatttt
atgacccgcatcgacagctacgccgaccggcgcgattttccggcgtccaagggccccagc
tatctgtcgatgcatttgcgcttcggcacggtctcgattcgcacgctcgcgcgccttgct
cacgagatgtcgctgcaacccgacggtcaaggctcggccacgtggttatcggaactgatc
tggcgggatttctacttcatgatcctggcgcatcatccgcggctggcgagcggcgcgtcg
ttcaaggaagagtacgaccgcctgcgctgggagcaaggcccggaagccgacgaggctttc
agcgcgtggtgcgacggccgcaccggttatccgctggtcgatgccgcgatgttgcaactg
aaccgcaccggctacatgcacaaccgcttgcggatggtcacggcgagttttctggtcaag
gatctgggggtggactggcggcttggcgagcgctatttcgccgagcaactgaacgacttc
gatttttcggcgaataacggcggctggcagtgggcggcgtcgacgggatgcgacgcacag
ccgtacttccggatcttcaacccgatcacgcagtccgaaaaattcgacgccgaagggcgt
ttcatcaagcgctatctgccggaactggcgaagctgccgcccaaatggatccatgcaccg
tggctggccggcgtggaacggctggcggacttaggggtggtgttgggcaaggattatccc
gcgccgatcgtcgatcatgcgcaagcgcgcgcgcgtacactggctcgtttcggcaagtga
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