Rubinisphaera brasiliensis: Plabr_0481
Help
Entry
Plabr_0481 CDS
T01431
Name
(GenBank) hydroxymethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
pbs
Rubinisphaera brasiliensis
Pathway
pbs00730
Thiamine metabolism
pbs01100
Metabolic pathways
pbs01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pbs00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Plabr_0481
Enzymes [BR:
pbs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
Plabr_0481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
Motif
Other DBs
NCBI-ProteinID:
ADY58108
UniProt:
F0SS97
LinkDB
All DBs
Position
571144..572943
Genome browser
AA seq
599 aa
AA seq
DB search
MSQSSSGARYTLPPLGTNPSSSAAGTNPGSFANPPQLGPGPEGARTFSSPDTPGMPAPSE
KTAWDFMPEGWQLKPGFENNYHQADAWQAPEGFEPVTQLESARLGIVTPEMTRVAEREPH
LTAEQVRDEVASGRMVIPANRVHLGHKLDPMCIGRASLTKVNANMGASPVSSGTEEEVEK
LLWSIRWGADTVMDLSTGGNLDECREAIIQNSTAPIGTVPIYSMIIGRKLKDLTHEIILD
SLEHQAEQGVDYFTVHAGVLRDHLQFVKKRLIGIVSRGGSLLAKWMLDHGAENPMYDLWE
DICQIMRRYDVTFSIGDGLRPGGLADATDQAQLAELCALGELTERAWRQGVQVMVEGPGH
VPFDQIEYNMKLQRTLCHGAPFYVLGPLVTDIFPGYDHITSCIGATSAAYHGASMLCYVT
PKEHLGLPKKDDVKQGCVAYKIAAHAADVALGIPGSRDRDDELTKARAALNWEKHFDLSF
DPDVARAYHDEDLDVDTDFCAMCGHDWCSVRISKEIVEFSSGKDENYAWEKARKSAALTD
EQKAILEQRGVLSPDEIHKLASKTKSVMGNEKDKASCHSDYVDSDQAQQLQQNLVELDK
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagtcatcatcaggggcccgttacactcttcctcccttgggaacgaacccctcc
agttccgctgccggaaccaacccgggtagtttcgccaatccgccacagttggggcccggt
ccggaaggcgcacggaccttctcctcccccgacacgcccggcatgcccgctccctcggaa
aaaaccgcctgggatttcatgcccgaaggctggcagctgaaacccggcttcgaaaacaac
taccaccaggccgacgcctggcaggctccggaaggctttgagcctgtgacgcagctggaa
tcggctcgtctgggaatcgtcacgccggaaatgacccgcgtggccgagcgcgaaccccat
ttgaccgctgagcaggttcgcgatgaagtcgcttccggccggatggttattcctgccaac
cgggtgcacctgggtcacaaactcgatccgatgtgtatcggtcgggcctcgctgaccaaa
gtgaacgccaacatgggagcgtctccggtttcttccgggactgaagaagaagtcgaaaag
ctgctctggtcgatccgctggggagccgacacggtgatggacctgtcgaccggtggaaac
ctggatgaatgccgtgaagcaattattcagaacagcaccgcgccgatcggaaccgtgccg
atttattccatgatcatcggccggaaactcaaagacctgactcacgaaatcatcctcgat
tcgctcgagcaccaggcagagcagggggtcgattacttcactgtccacgctggcgttctt
cgcgatcacctgcagttcgtgaaaaaacgtttgatcggaatcgtctcccgcggcggctcg
ctgctggccaagtggatgctcgatcatggcgctgaaaacccgatgtacgacctgtgggaa
gacatctgccagatcatgcggcgttacgatgtgacgttcagcattggcgatggactccgc
ccgggtggactggccgacgcgaccgatcaggctcagctggccgaactgtgtgctcttggc
gaactgaccgaacgggcctggcgccagggtgtgcaggtcatggtcgaaggtcccggccat
gtgccgttcgaccagatcgaatacaacatgaaactgcagcggaccctgtgtcacggggct
ccgttctacgtgctcggcccgcttgtgactgacatcttccccggctacgaccacatcacc
agctgtatcggagcgacctcagctgcgtatcacggagcgagcatgctctgttacgtcacg
ccgaaggagcacctcggtctgccgaaaaaagacgatgtcaaacagggctgcgtcgcctac
aaaattgctgcccacgcagccgatgtggcgctcgggattcccggctcgcgcgatcgtgat
gacgagctgaccaaagctcgcgccgctctgaactgggaaaaacacttcgatcttagcttc
gatcccgatgtcgcgcgtgcttatcacgatgaagacctggatgtcgacaccgacttctgt
gcgatgtgcggccacgactggtgcagcgtgcgaatttccaaagagattgtcgagttcagc
tctggcaaagatgagaactacgcctgggagaaggctcgcaaatcagccgcattgaccgac
gagcagaaagcgatcctcgaacaacgcggcgtcctcagcccggatgaaatccataagctg
gccagcaaaaccaagtcggtcatgggcaacgaaaaggacaaagcctcctgtcacagcgat
tacgtcgactccgaccaggcccagcagttgcagcagaatctggtggaactcgataaataa
DBGET
integrated database retrieval system
