Rubinisphaera brasiliensis: Plabr_0799
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Entry
Plabr_0799 CDS
T01431
Name
(GenBank) ATP-dependent DNA helicase, Rep family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pbs
Rubinisphaera brasiliensis
Pathway
pbs03420
Nucleotide excision repair
pbs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pbs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Plabr_0799
03430 Mismatch repair
Plabr_0799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbs03400
]
Plabr_0799
Enzymes [BR:
pbs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Plabr_0799
DNA repair and recombination proteins [BR:
pbs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Plabr_0799
MMR (mismatch excision repair)
Other MMR factors
Plabr_0799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
PcrA_UvrD_tudor
ADDB_N
Tudor_1_RapA
DEAD
Motif
Other DBs
NCBI-ProteinID:
ADY58422
UniProt:
F0SHI4
LinkDB
All DBs
Position
complement(937231..939543)
Genome browser
AA seq
770 aa
AA seq
DB search
MDAFDFPPPAAQPQIQLTPSQQAAVEHVEGPMLVLAGPGSGKTRVVTQRVARLIEKGINP
WNILAITFTNKAASEMSERLQGLTDTRNLWVSTFHRFCANVLRQRANVVGLQQNFTILDS
ADQKQAIKQVLSELDFDAAHYPPGKILATISNAKNDLVSADAFNQQFEESVADHFTAVVA
RVYPAYQKFLMESNAVDFDDLLLHVVRLFEENEELRARYDERYQYILVDEYQDTNEAQYR
IVRALSQNARNLSVTGDPDQSIYGWRGAKIDNILRFEKDFEDAKVIKLEQNFRSTKLILA
AADSLITHNRLRKAKELTTDNDEGEPVELLHFPDSGTEADSIARHIRHLVEEEGRDWSDF
AIFYRVNSLSRQLELALGRHHVPYQVAAGVAFYQRAEVRDVLQYLELINNPRNRPAFMRV
VNTPLRGIGKTSQNRLMSYAEQHNMSYLEAAAEADKVPKMSKRAAASLKAFSRMMSGFSL
ANSGSVANLIEDVVTQTDYCKQWLSNPSEQDLQRQANVDELISAARNHDTIYDADTSLEG
FLETTSLVSDLDALEQQNNNSGKVTLMTLHAAKGLEFPVVYIVGVEQNLLPHERSLREGN
PREYEEERRLFFVGITRAMQQLYVTSSRYRDLHGRSMPTIPSDFLSEIDLVQTDGTTLTE
KLPDTTPMSPLKKYGLDESDLPKIREAMQQLETPRLVTGASLLSGNKDTANLPFNFPIGS
SVRHPRYGLGTVISVGGYGARRTVSVEFEAEDRTETFIVSKCPLQPVGNS
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggacgcattcgactttccgcccccggccgcccagccccagattcaactcacgcccagc
cagcaggcggcggtcgagcatgtggaaggtccgatgctcgtgctcgccgggcccgggtcg
gggaaaacgcgtgtcgtcacccagcgggtcgcccggctgatcgaaaaggggatcaatccc
tggaacattctggcgatcacgttcaccaacaaggccgcttccgaaatgtcggaacgactg
caggggttgaccgacacgcgcaatctgtgggtgagcacgtttcaccgtttctgtgccaac
gtgttgcggcagcgggcgaatgtggtcgggctgcagcagaacttcaccattctcgactcg
gctgaccagaaacaggcgatcaaacaggtcctcagcgagctcgatttcgatgccgcccat
tatccgccgggcaaaattctggcgacgatcagcaacgcgaaaaacgacctggtctctgcg
gacgccttcaaccagcagtttgaagaatcggtcgctgaccacttcaccgcggtggtcgct
cgcgtgtacccggcttaccagaagtttctgatggagtcgaacgcggtcgatttcgacgat
ctgctgctgcatgtcgtccggctgttcgaagagaacgaagaactgcgggcccgctacgac
gaacgctaccagtacattctggtggacgaataccaggacactaacgaagcgcaatatcga
attgttcgagccctgtcgcagaatgcgcggaatctgtcggtcaccggggatcccgaccag
tcgatttacggctggcgcggggcgaaaatcgacaacatcctccgcttcgaaaaagacttt
gaagacgctaaggttattaagctggagcagaacttccgcagcaccaagctgattctggcc
gctgccgattcgctgattacccacaaccggctgcggaaagccaaagagctgacgaccgac
aacgacgaaggggaaccggtcgaactgctgcacttcccggacagcggaaccgaagcggac
agcatcgcccggcatatccggcatctggttgaagaagaaggccgggactggtctgacttc
gcaattttctatcgcgtgaactcgctgtcacgtcaactcgagttggctcttggtcggcat
catgtgccgtatcaggtagcagccggcgtagcgttctaccagcgggcggaagtgcgcgac
gtgctgcagtatctggagttgatcaacaacccgcgtaaccgaccggccttcatgcgagtg
gtcaatacgccgctgcggggcatcggcaaaaccagccagaatcggttgatgagctacgcc
gagcagcacaacatgtcctacctcgaagcagcagccgaggcggacaaggtgccgaaaatg
tcgaaacgggcagccgcctcgttgaaggcgttttcacgcatgatgagtggtttttcgctc
gccaattccggctccgtcgcgaacctgattgaagatgtcgtcacgcagaccgactactgc
aaacagtggctgtccaacccgagcgagcaggatctgcagcggcaggcgaacgtcgacgaa
ttgatttctgccgcccgcaatcacgacaccatttacgacgccgacacctcgttggaaggc
ttcctcgaaaccacatcactcgtctccgacctcgacgcactcgagcagcagaacaacaat
tccggcaaggtgacattgatgacgctgcacgccgccaagggcttggagtttccggtcgtg
tacatcgttggggtcgaacaaaacctgctgccgcatgaacggtcactccgcgaagggaat
ccgcgcgagtacgaagaggaacgccgtctgtttttcgtgggcatcacccgggcgatgcag
cagttgtacgtgacttcttcccgttaccgtgacctgcacggccggtcgatgccgaccatt
cccagcgatttcctatccgaaatcgacctcgttcagaccgacggcaccacgctgaccgaa
aagctgcccgacaccacgccgatgagtccactgaagaaatacgggctggatgaatcggac
ctgccgaaaattcgcgaagcgatgcagcagctcgaaaccccacgcctcgtcaccggagcg
tcgctgctgtcgggcaacaaagacaccgccaacctgccgttcaacttcccgatcggctcc
tcagtccggcatccccgctacggcctggggacagtcatttccgtcggcggctacggagcc
cgcagaaccgtttcggtcgaattcgaagccgaagaccgaacagagacttttatcgtcagt
aagtgtccattgcagccggtcgggaattcgtaa
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