Rubinisphaera brasiliensis: Plabr_1412
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Entry
Plabr_1412 CDS
T01431
Name
(GenBank) RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
pbs
Rubinisphaera brasiliensis
Pathway
pbs02020
Two-component system
pbs02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pbs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Plabr_1412
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Plabr_1412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbs03021
]
Plabr_1412
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pbs02035
]
Plabr_1412
Transcription machinery [BR:
pbs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Plabr_1412
Bacterial motility proteins [BR:
pbs02035
]
Flagellar system
Flagellar assembly proteins
Stator
Plabr_1412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
MarR_2
GerE
MarR
PCI
Motif
Other DBs
NCBI-ProteinID:
ADY59024
UniProt:
F0SPR5
LinkDB
All DBs
Position
1655178..1655957
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AA seq
259 aa
AA seq
DB search
MATKLSPEEVLEIWEAYKKDQTNQHLRNRLIERYLPLVRYNAERVWAKLPDGVDLNDLMS
AGVFGLMDAIDAFDMERGVKFETYCVPRIRGAMLDELRTMDWVPRLVRSKASKLAAASKA
VEAETGRPPTDVEVAAKMELSLEEFEKLKSEAAAVGLVSLNKKWYETDSYKDVREVDILE
DGKGEDPTNGIQKRDIMKLVTKGLNRNERLIMILYYYEELTMKEIGMTLGLSESRVSQMH
SSIVNRLKDQLRKRRPEFA
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggcgactaaactatcaccagaggaagtactcgaaatctgggaagcttataaaaaggat
cagacgaaccagcatttgcggaatcgtctgatcgagcggtatctgccgctggtccgttac
aacgccgagcgcgtctgggccaagcttcccgatggagtcgacctcaacgatttgatgagc
gcaggcgtgttcggcctgatggacgcgatcgatgcattcgacatggaacgcggcgtcaag
ttcgaaacctactgtgttcctcgtatccgcggggcgatgctcgacgaactgcgtaccatg
gactgggttccccgtctggtccgtagcaaagcaagcaaactggccgccgccagcaaagcg
gtcgaagccgaaaccggtcgtccaccgacagatgtggaagtggcggccaaaatggaactg
tcgctcgaagagtttgaaaaactcaaatccgaagcggcagccgtcggcctggtcagtctc
aacaaaaaatggtacgagacggacagctacaaagacgttcgcgaagtcgacattctggaa
gatgggaagggtgaagacccgaccaacggcatccagaaacgcgacattatgaagctcgtg
acgaaagggctgaatcgcaacgaacgactgatcatgatcctctactactatgaagagttg
accatgaaagaaatcggcatgacgctcggcctgtccgaatcgcgcgtcagccagatgcac
tccagcatcgtcaatcgcttgaaggatcagctccgcaagcgacggccggagttcgcgtaa
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