Rubinisphaera brasiliensis: Plabr_1439
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Entry
Plabr_1439 CDS
T01431
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pbs
Rubinisphaera brasiliensis
Pathway
pbs03030
DNA replication
pbs03410
Base excision repair
pbs03420
Nucleotide excision repair
pbs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Plabr_1439
03410 Base excision repair
Plabr_1439
03420 Nucleotide excision repair
Plabr_1439
03440 Homologous recombination
Plabr_1439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbs03032
]
Plabr_1439
03400 DNA repair and recombination proteins [BR:
pbs03400
]
Plabr_1439
Enzymes [BR:
pbs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Plabr_1439
DNA replication proteins [BR:
pbs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Plabr_1439
DNA repair and recombination proteins [BR:
pbs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Plabr_1439
NER (nucleotide excision repair)
GGR (global genome repair) factors
Plabr_1439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
Vir1p
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ADY59051
UniProt:
F0SQM1
LinkDB
All DBs
Position
1686211..1689009
Genome browser
AA seq
932 aa
AA seq
DB search
MPEKLYLIDTFSLLFQVYHAIPPMTGPSGQPTNAVFGFTRDILMILKQKKPDYLLCALDS
EGPGLRSDWYPEYKIQRTEMPEDMVPQLPMLTEVIEAFGIPAVKHAGWEADDVIATLARQ
AEAAGLQVNIVSSDKDCRQLLSETVRMFNCRKGEYFGPPELEKTWGVRPDQVIDFQSLVG
DSVDNVPGVPLVGPKKAAALLEQFGDLDSVLANADKAPGKKLRENLVEFADQARVSKRLV
TLNTDLPLNFDLESARVGNIDVGKLQQLFLDYGFRKFRDDLHELDGDLTVNIPMRSGQRS
LFDSPTSNTGSKAGNQTDTPAVEESTPAPFQTDRDWSIIRETDELQALVDGWMKDCEEIY
IDLETTSVTAMEADIVGWAVAAKPGEAFYIPVRGPAGQQTMDNQEVLDIFRPLLENPRIA
ISNQNIKYDLLVWKRHGIELQKIGMDPMVGHYLLDAGARSHGLSSLADEFLKHRMIPISE
LIGTGKNQKRMDEIDIDQVAEYASEDADAALQIADIIRDKLHEQELWNLYQDVERPLIGV
LAEMEFAGIRVDDEELFRQSELVGRRVEELLEELEGMADRPFNPDSPKQLREVLFDEIGL
PVQKRTKTGPSTDQSVLEKLAPLHPLPAKIIEYRQLAKLKGTYLDSLPKLINQQTGRIHA
SFNQVVAATGRLSSSDPNLQNIPIRTPEGRQVRKAFIPGEPGWELLCCDYSQIELRVLAH
FSGDAALQEAFQSGKDIHTAVAAEVFEVDEANVDSDMRRVAKAVNFGVIYGQSPYGLAAA
LNIPQEQAAEFIDDYFMRYPGVSQFIEETLEQCARSGYAYTMLGRRRPITGIKNTGGRNR
NMPERTAINTVIQGSAADLIKLAMLNVHRELATSGLSARMLLQIHDELVFETPVEELEPL
RELVHREMVNAHPLSVPLVVDMKHGENWYDAE
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaaaactgtatctcatcgacaccttctcgctgctctttcaggtgtatcacgcc
attccgccgatgaccgggccatccgggcagccgacgaacgccgtgttcggcttcacccgc
gacattctgatgattctcaagcagaagaaacccgattacctgctttgcgccctcgattcg
gaagggcccggcctgcgctccgactggtatcccgaatacaaaattcagcggaccgaaatg
cccgaggacatggtcccgcagctgccgatgctgaccgaagtgatcgaagcgttcggcatt
cccgccgtcaaacacgccggctgggaagcagacgacgtcatcgccacgctcgcgcgacag
gcggaagcggccgggctgcaggtgaatatcgtctccagcgacaaagactgccgacagctg
ctcagcgaaacggtccgcatgttcaactgccgtaaaggggaatacttcggcccgcctgaa
ctcgaaaaaacctggggcgtccggcccgatcaggtgatcgacttccagtcgctcgtgggc
gattcagtcgacaacgtccccggggttcctttggttggcccgaagaaagcggctgccctg
ctcgaacagtttggagacctcgatagcgtacttgccaacgcggacaaagctcccggtaaa
aagctgcgggaaaacctcgtcgagttcgccgatcaggcccgcgtcagcaaacggctggtt
acgctgaataccgatcttccgctcaacttcgatctggaatcggctcgcgtcgggaatatc
gatgtcggcaagctgcagcagctgttcctcgattatggcttccgcaaattccgcgatgac
ctgcacgaactggatggcgatctgaccgtcaatattccgatgcgttccggtcagcgttcg
ttgttcgacagcccgaccagcaacacggggagcaaagcaggcaatcaaacagacactccc
gcagtcgaagagtccactcccgctccgtttcagaccgatcgcgactggtcgatcattcgc
gagacagacgaactgcaggcgctggtcgacggctggatgaaggactgcgaagagatctat
atcgacctggaaacaacgtccgtcaccgcgatggaggccgacattgtcggttgggcggtc
gcggcaaaaccgggcgaagcgttttacattccggtccgcggcccagcgggccagcaaacg
atggacaatcaggaagtgctcgacatcttccgcccgctgctcgaaaacccgcgaattgcg
atcagcaatcagaacatcaaatacgatctgctcgtgtggaaacggcatgggattgagctg
caaaagatcggcatggatccgatggttggccattacctgctcgacgccggggcacgcagt
catggcctcagttcgctggccgacgagtttctgaagcaccgcatgatcccaatttccgag
ctgatcggcaccgggaaaaatcaaaagcggatggacgaaattgacatcgatcaggtggcc
gagtatgcctccgaagatgccgacgcagcgttgcagattgcagacatcattcgcgacaaa
ctgcacgaacaggaactgtggaatctgtatcaggatgtcgagcgcccgctcatcggagtg
ctcgccgaaatggagttcgccggcatccgtgtcgatgatgaagaactgttccgccagagt
gagctggtcggacggcgtgttgaagaactgctcgaagaactggaagggatggccgaccgg
ccgttcaatcccgactcaccaaagcagctccgcgaagtgctgttcgacgaaatcggcctg
ccggtccagaaacggaccaaaaccgggccgagcaccgatcaatcggtcttggaaaaattg
gccccgttgcatccgctgccggccaaaatcatcgaatatcgccagctggccaagctcaaa
gggacctacctcgattctctgccgaagttgatcaaccagcagaccggccggattcatgcg
tcgttcaatcaggtggtcgctgccaccgggcgactcagttccagcgacccgaacctgcag
aacattcccattcgcacgccggaaggccggcaggtccgtaaagccttcattcccggcgag
ccgggctgggaacttctctgctgtgactactcacaaatcgaacttcgcgtgctcgcccac
ttcagtggagatgctgcgttgcaggaagcgttccagtcggggaaagacattcacaccgcc
gttgcagccgaggtgtttgaagtcgacgaagctaacgtcgattccgacatgcgtcgcgtc
gccaaagcggtcaacttcggtgtcatctacggccaaagcccatacggcctggcggctgca
ttgaacattccgcaggaacaggcggccgagttcatcgacgactacttcatgcgatacccc
ggcgtctcgcagttcatcgaagagaccctcgaacagtgtgcccgcagcggctacgcctac
accatgctcggccgacggcgcccgatcaccggcatcaaaaacaccggcggccggaatcgc
aacatgcccgaacgaaccgcgatcaacaccgtcattcagggctcagcagcggacctgatc
aaactggcgatgctcaacgtgcatcgcgaactggccacctccggcctgtccgcccgcatg
ctactgcaaatccacgacgaacttgtctttgaaaccccggtcgaagaactcgaaccgctc
cgcgaactcgtgcaccgcgaaatggtcaacgcccacccactcagcgtccccctcgtggtc
gacatgaaacatggcgaaaactggtacgacgcggaataa
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