Rubinisphaera brasiliensis: Plabr_2881
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Entry
Plabr_2881 CDS
T01431
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pbs
Rubinisphaera brasiliensis
Pathway
pbs00260
Glycine, serine and threonine metabolism
pbs00460
Cyanoamino acid metabolism
pbs00630
Glyoxylate and dicarboxylate metabolism
pbs00670
One carbon pool by folate
pbs00680
Methane metabolism
pbs01100
Metabolic pathways
pbs01110
Biosynthesis of secondary metabolites
pbs01120
Microbial metabolism in diverse environments
pbs01200
Carbon metabolism
pbs01230
Biosynthesis of amino acids
pbs01240
Biosynthesis of cofactors
pbs04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pbs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Plabr_2881
09102 Energy metabolism
00680 Methane metabolism
Plabr_2881
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Plabr_2881
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Plabr_2881
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Plabr_2881
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Plabr_2881
Enzymes [BR:
pbs01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Plabr_2881
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
SelA
Motif
Other DBs
NCBI-ProteinID:
ADY60480
UniProt:
F0SFM0
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All DBs
Position
complement(3462997..3464259)
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AA seq
420 aa
AA seq
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MPEATNERFDALSQTDPEILQTILDETRRQQEGLELIASENYTSAAIQQAVGSVMTNKYA
EGYPGRRYYGGCEYVDVAESLARTRAQELFGAEHVNVQPHAGSQANMAVFMTVMQPGDTF
LAMDLAHGGHLTHGMHLNFSGNLYKPVHYGVSESDHRIDYDHVAKLAREHKPKMIIAGAS
AYPREIDHAKFGEIAKDVGAKLMVDMAHYAGLVAGGIHNSPVPVADFVTSTSHKTLRGPR
SGFILSREEYAKDLDRTVFPGLQGGPLMHVVAAKAICFREALQPSFKEYAQQIVDNARVL
ADTLMAGGLRLASGGTDNHLMLTDVTSLNTTGKVAEKALDRAGITVNKNMIPYDQRKPLD
PSGIRIGTAALTTRGMKQDDMKRVGEWILRVLKNVEDDSVIETVQNEVREFASAFPVPGA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgccggaagccaccaacgaacggttcgacgcactttcccagaccgatcctgaaattctg
cagacgattctggacgaaacccgtcgtcagcaggaaggactggagctgattgcttcggaa
aactacacatccgctgccattcagcaggcggtcggcagtgtcatgaccaacaaatacgcc
gaaggctaccccggccggcgctattacggcggttgcgagtacgtcgacgttgccgagtct
ctggcccgcacccgggcgcaggagctgttcggagcagaacacgtcaatgtgcagccacac
gcagggtctcaggccaacatggctgtcttcatgacggtcatgcaaccgggcgacacgttc
ctggcgatggacctggcccacggcggccacctgacccacggtatgcacctgaatttctca
ggtaatctgtacaagccggttcattacggcgtgagcgagtctgatcatcgcatcgactac
gatcacgtcgccaaactggcccgtgaacacaaacccaaaatgattatcgccggggcaagt
gcttacccgcgcgaaatcgaccacgccaagttcggggaaatcgccaaagatgtcggggcc
aaactgatggtcgacatggcgcactacgccggtctggtcgccggggggattcacaacagc
ccagtgcctgttgctgactttgtgacatcaacatcacacaagacgctgcgtggcccacgt
tccggattcatcctgagccgtgaagaatacgcaaaagacctggatcgcaccgtcttccca
ggtcttcagggtggtccgctgatgcatgtggttgccgcgaaagcaatctgcttccgcgaa
gcactgcaaccctccttcaaagaatacgctcagcagatcgtcgataacgcccgcgtgctg
gccgataccctgatggccggcggcctgcgtcttgcttctggcggtaccgacaatcacctg
atgctgaccgacgtgacttcgctgaacacgaccggaaaagtggctgaaaaagctctcgac
cgggctggaatcacggttaacaagaacatgattccttatgaccagcggaaaccgttggat
ccgagcggtatccgtatcggaacggccgccctcacaacacgtggcatgaaacaggacgac
atgaagcgtgtcggagagtggattctgcgtgtgctgaagaatgtcgaagacgacagcgtg
atcgaaactgtccagaacgaagtgcgggaatttgcttccgcattccccgtgcccggagcc
tga
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