Rubinisphaera brasiliensis: Plabr_4011
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Entry
Plabr_4011 CDS
T01431
Name
(GenBank) Porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
pbs
Rubinisphaera brasiliensis
Pathway
pbs00860
Porphyrin metabolism
pbs01100
Metabolic pathways
pbs01110
Biosynthesis of secondary metabolites
pbs01120
Microbial metabolism in diverse environments
pbs01240
Biosynthesis of cofactors
Module
pbs_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
pbs00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Plabr_4011
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pbs04147
]
Plabr_4011
Enzymes [BR:
pbs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
Plabr_4011
Exosome [BR:
pbs04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Plabr_4011
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Gene cluster
GFIT
Motif
Pfam:
ALAD
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ADY61588
UniProt:
F0SGI3
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All DBs
Position
4952362..4953375
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AA seq
337 aa
AA seq
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MSSPQFPFQQFPQTRMRRNRQTEWSRRLVRENVLTVNDLIWPVFVCEGSNERIPVPSMPG
VSRLSIDLLVEEVREAAQLGIPAVAIFPATPTHLKTAEADEALNPQNLVCRAVRAVKDAG
IDIGVICDVALDPYTSHGQDGLVRDGEVVNDESLDMLCKQAVLQAEAGCDVIAPSDMMDG
RIGRIRQALDAGGLANVQIMAYAAKYASAFYGPFRDAVGSASNLGTGDKRTYQMDPANGD
EALREVALDLQEGADMVMVKPGMPYLDIVQRVKSTFQVPTYAYQVSGEYAMMVAAAELSY
FDHDRIMLESLLGFKRAGADGILTYFAPQAARLLANG
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaccgcaattcccttttcagcagtttccgcaaacgagaatgcgacgtaatcgc
cagaccgaatggtcgcgacgcctcgttcgtgaaaacgtgttgaccgtcaacgatttgatc
tggccggtttttgtttgcgaagggtcgaacgaaagaattcccgttccctcaatgccgggg
gtctcccgcctttcgatcgatctgctggtcgaagaagttcgcgaagcagcgcaactgggc
attcctgcggtcgccattttcccggctactccaacacatttgaaaacggccgaagcggat
gaagctttgaatccgcagaatctggtctgccgcgccgttcgagcggtgaaagatgcaggc
attgatatcggagtcatctgcgatgtcgcactcgatccttacaccagtcacggacaggac
gggctggttcgtgatggcgaagtggtcaacgatgaatctctggacatgctctgtaaacaa
gccgtgctgcaggccgaagccggctgcgatgtgatcgctccttccgacatgatggacggc
cgtattggtcggattcgccaggctctcgacgcgggtggtttggcgaatgttcagatcatg
gcttatgccgccaaatacgcgtctgcattctatggccccttccgcgatgccgtcggctcg
gcaagcaatctgggaaccggtgataaacgcacctaccagatggaccccgccaacggtgac
gaagctcttcgcgaggtcgccctcgatcttcaggaaggggcagacatggtgatggtgaaa
cccggcatgccgtatctcgacattgtgcaacgagtgaaatcaacatttcaggtgccgaca
tacgcgtaccaggtcagcggcgaatacgcgatgatggtcgctgcagctgagctgagctat
ttcgatcacgaccgcatcatgctggaaagcctgctcggcttcaaacgggctggtgccgat
ggcattctcacctacttcgctccgcaagcagcgcggttactggccaacggctga
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