Rubinisphaera brasiliensis: Plabr_4728
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Entry
Plabr_4728 CDS
T01431
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pbs
Rubinisphaera brasiliensis
Pathway
pbs00300
Lysine biosynthesis
pbs00470
D-Amino acid metabolism
pbs01100
Metabolic pathways
pbs01110
Biosynthesis of secondary metabolites
pbs01120
Microbial metabolism in diverse environments
pbs01230
Biosynthesis of amino acids
Module
pbs_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pbs00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Plabr_4728
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Plabr_4728
Enzymes [BR:
pbs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Plabr_4728
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF1955
Motif
Other DBs
NCBI-ProteinID:
ADY62299
UniProt:
F0SQC0
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All DBs
Position
complement(5876624..5877913)
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AA seq
429 aa
AA seq
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MPSPLNPFEYRNNELYCEDVPVRQLAEEYGTPLWVYSEAKFLEEFRQLKKAFEACDPVIC
YSVKANSNLHVLKALNEAGSSFDVVSGGELFRVLKAGADTTRVVFAGVGKTDAEIRLALE
QNILMFNVESEAELDAIAAVAREMDVVAPVALRLNPDIDAKTHKKTTTGKKGNKFGMDIE
RHNALADKVLTEPHLELRGIHMHLGSPILTTDPYEQAAKKAVDVIADLRKKGHDISWVNL
GGGFALSYRNDEAPDYSTYASVIVPHIQAAGCKLALEPGRSIIGNACVLVSQVIYTKREG
GKLFVIQDGAMNDLARPAMYDAFHRVWPVQTDVPLPYDCEAAEIEGCEATDVVGPVCESS
DYFAKDRALPPLQRGDLISTFSAGAYGSAMSSNYNSRPRGAEVLVSGSEARLIRKRETYD
DLIALEEQV
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgccgagtccgttgaatccgtttgaatatcgcaataacgaactgtactgcgaagacgtt
cccgttcgtcagctggccgaagaatacggcacgccgttgtgggtgtattccgaagccaaa
tttctggaagagttccgccagctgaagaaggctttcgaagcctgcgatccggtcatctgc
tattccgtgaaagccaactcgaacctgcacgtgctgaaagctttgaacgaagcgggcagc
agtttcgatgtcgtctccggcggagaactgttccgcgttctcaaagcaggcgcggacacc
actcgcgttgtgtttgccggtgtcgggaaaaccgacgcggaaatccgcctcgctctcgaa
cagaacattctgatgttcaacgtcgaaagtgaagccgagctggatgcgattgccgccgtt
gctcgcgaaatggatgttgtcgcccccgtggcgctgcggttgaatccggacatcgacgcc
aaaacccacaaaaaaaccacgaccgggaaaaagggcaacaagttcggcatggatatcgag
cgtcacaatgctctggccgacaaagtgctgaccgagccgcatctagaattgcgcggtatt
cacatgcacctgggttccccaattctgaccaccgatccttacgagcaggcagcgaaaaaa
gcagtcgatgtgattgctgacctgcggaaaaaaggacacgacatcagctgggtcaacctc
ggtggaggattcgcgctcagctatcgcaacgacgaagcgcccgattactcaacctacgcc
agtgtgattgttccacacattcaggccgccggctgcaaactggcattggagccaggacgt
tcgattatcggcaacgcctgtgttctcgtcagtcaggtgatttacaccaaacgcgaaggc
ggaaagctgttcgtcattcaggacggggcgatgaacgatctggctcgtccggccatgtac
gatgccttccatcgcgtctggccggttcagaccgacgtcccgctgccttacgattgtgaa
gcggcagaaatcgaaggctgcgaagcgaccgacgttgtcggcccggtgtgcgaatcgagc
gattacttcgccaaagatcgcgctctcccgccgctgcaacgaggcgatttgatttccacc
ttcagcgctggagcttacggatcggcgatgagcagcaactacaactcccgtcctcggggg
gcagaagtgctcgtcagtggcagcgaggcccggttgattcgcaaacgcgaaacctacgat
gacctgatcgctctggaagaacaggtgtag
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