Fermentimonas caenicola: ING2E5B_0007
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Entry
ING2E5B_0007 CDS
T03818
Symbol
radA
Name
(GenBank) DNA repair protein RadA homolog
KO
K04485
DNA repair protein RadA/Sms
Organism
pbt
Fermentimonas caenicola
Brite
KEGG Orthology (KO) [BR:
pbt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbt03400
]
ING2E5B_0007 (radA)
DNA repair and recombination proteins [BR:
pbt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ING2E5B_0007 (radA)
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Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
Lon_C
AAA
AAA_22
DUF7125
DnaB_C
AAA_24
nSTAND_NTPase5
AAA_16
nSTAND3
AAA_14
Isochorismatase
NTPase_1
DUF815
AAA_5
Motif
Other DBs
NCBI-ProteinID:
CEA14591
UniProt:
A0A098BYS0
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Position
chrI:7382..8809
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AA seq
475 aa
AA seq
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MYFCSTANQDWSGSEYKIKIMAKLKSVYFCSNCGFESPKWMGKCSACGEWSTFVEELVRK
NAVSAQEDTRSFSDIKSKPLPLKEIKADEEQRIDMSDEELNRVLGGGLVPASVVLLGGEP
GIGKSTLVLQTILKLRGIRTLYVSGEESARQLKLRADRLSIENDDCLLLCETNLDDIFKH
AKEVAPQFLIIDSIQTIYTESLESSPGSISQVRECASLLLKYAKQSGIPVLLVGHITKDG
SIAGPKILEHIVDAVLQFEGDQHYMYRILRGIKNRYGSTAELGIYEMNQTGLREVSNPSE
LLLTRNHDELSGVAISAAIEGIRPFLIETQSLVSTAAYGTPQRSTTGFESRRLNMLLAVL
EKRAGFKLAQKDVFLNIAGGLRVNDPGMDLAVISAVLSSSLDISIDNDTCLCGEVGLSGE
IRPVNRIEQRVQEADKLGFSRILIPHNNLKGFNKKLSIEIREVKKVTDAFRMLFS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtatttttgttcaacagccaatcaggattggagtggttcggaatataagataaagata
atggcaaaacttaaatcggtctatttttgcagtaattgtgggtttgaatctccaaaatgg
atggggaaatgttcagcttgtggcgagtggtcaacattcgtagaagaactggtgcgcaaa
aatgctgtgtcggctcaggaagatacacgttcgtttagtgatataaaaagcaaacccttg
cctctgaaggaaattaaagcggatgaggagcaaaggattgatatgagtgatgaagaactg
aaccgtgtattgggtgggggactggttcctgcatctgttgttctgcttggaggtgaacca
ggtatcggtaaatcaacgctagtactacaaacaatactaaagctaaggggtattcgcaca
ctgtatgtctccggtgaagagagtgcacgacagcttaaactgagagctgacagattgtca
attgaaaacgacgactgcctgttactttgtgaaacaaatctggatgatatttttaaacat
gcaaaggaggttgctcctcagtttctgataatagattctattcagactatttataccgaa
tcacttgaatcttcacccggtagtatttctcaagtacgcgaatgtgcttcattattgctg
aagtatgcaaaacagagtgggatacctgttttacttgtgggacatatcacaaaagatggc
agtatagccgggccaaagatactggagcatatagtggatgctgtactgcagttcgagggc
gatcagcattatatgtatcgtatcctgagaggtataaaaaacagatatggaagtacagcc
gaattgggtatctacgagatgaatcagacagggttgcgcgaagtaagtaatccttcggaa
ctactgctaacgcgaaatcatgatgagttaagcggagttgcaatttcggctgcaattgag
gggattcgtccatttctaatagagactcagtcgctggtaagcactgctgcatatggtact
cctcagcgttcaactacaggttttgagtcgagaagattaaacatgcttctcgccgttctt
gagaaaagagcaggctttaagctggctcagaaagatgtatttctgaatattgcaggtgga
ctcagagttaatgatcccggtatggaccttgcagttataagtgctgtactctcttccagt
cttgatatttcaattgataatgatacctgtctatgtggggaggtgggactttcaggcgag
attcgtccagtaaaccgaatagaacagagggttcaggaggctgataaacttggtttctca
cgtatactgattccacataataatcttaaagggtttaataaaaaactctcaattgaaatt
agagaagtgaaaaaagtaactgatgctttcaggatgcttttttcataa
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