Fermentimonas caenicola: ING2E5B_0052
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Entry
ING2E5B_0052 CDS
T03818
Name
(GenBank) Bacterial DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pbt
Fermentimonas caenicola
Brite
KEGG Orthology (KO) [BR:
pbt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbt03032
]
ING2E5B_0052
03036 Chromosome and associated proteins [BR:
pbt03036
]
ING2E5B_0052
03400 DNA repair and recombination proteins [BR:
pbt03400
]
ING2E5B_0052
DNA replication proteins [BR:
pbt03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ING2E5B_0052
Chromosome and associated proteins [BR:
pbt03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
ING2E5B_0052
DNA repair and recombination proteins [BR:
pbt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
ING2E5B_0052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-CCDC81_euk_1
DUF5854
PqqD
Motif
Other DBs
NCBI-ProteinID:
CEA14686
UniProt:
A0A098BVY7
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All DBs
Position
chrI:54151..54438
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AA seq
95 aa
AA seq
DB search
MTKADIVNEIAKRTGVDKTSVLSTVESFMDVVKDSLANDENVYLRGFGSFIVKKRAQKTA
RNISKNTTIIIPAHNIPAFKPSKTFVAQVKEVKVD
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagcagatattgtaaacgaaattgcgaagaggactggtgtagacaaaacatcg
gtgttatcaacagttgaatctttcatggatgtggtaaaagattcattggctaacgatgaa
aatgtatatttaagaggattcggaagcttcatcgttaaaaaaagagctcaaaaaactgcg
cgtaatatttcaaagaatacaactatcatcataccagcacataatatacccgcattcaag
ccatcaaaaacgtttgttgctcaggtaaaggaagttaaagtagattaa
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