Fermentimonas caenicola: ING2E5B_0187
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Entry
ING2E5B_0187 CDS
T03818
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pbt
Fermentimonas caenicola
Pathway
pbt00521
Streptomycin biosynthesis
pbt00523
Polyketide sugar unit biosynthesis
pbt00525
Acarbose and validamycin biosynthesis
pbt00541
Biosynthesis of various nucleotide sugars
pbt01100
Metabolic pathways
pbt01110
Biosynthesis of secondary metabolites
pbt01250
Biosynthesis of nucleotide sugars
Module
pbt_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pbt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
ING2E5B_0187 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
ING2E5B_0187 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
ING2E5B_0187 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
ING2E5B_0187 (rfbB)
00525 Acarbose and validamycin biosynthesis
ING2E5B_0187 (rfbB)
Enzymes [BR:
pbt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
ING2E5B_0187 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
adh_short
NmrA
KR
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
CEA14957
UniProt:
A0A098BZB1
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Position
chrI:186153..187220
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AA seq
355 aa
AA seq
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MSKMGRKNILITGGAGFIGSHVVRHFINSYPEYKIINVDALTYAGNLLNLKDIEDRENYT
FVKADICDFSEMQNLFRKYEIDSVIHLAAESHVDRSITDPFSFARTNIMGTLNLLQAARE
YWNNDFSNKLFYHVSTDEVYGSLEFGEHPFTETTSYDPHSPYSASKASSDHFVRAYRDTY
GLPIVISNCSNNYGPYQFPEKLIPLFINNIRHNKPLPVYGKGENVRDWLYVEDHAKAIDV
IFHKGKRGDTYNIGGLNEWKNIDLIHQVVKVCDKLLGRAEGESEKLITYVTDRAGHDLRY
AIDATKLTSELGWKPSLQFEEGLEKTVRWYLDNQDWLDHVTSGEYMNYYKQMYGE
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaaaatgggaagaaaaaacatattaattacaggaggtgccggttttataggttca
catgtagtaaggcattttattaatagttatcctgagtataagattattaatgttgatgct
ctcacttatgcaggcaacttgcttaatctgaaggatattgaggatagagaaaattatact
tttgtaaaagctgatatatgtgatttttctgaaatgcaaaatcttttcagaaagtatgaa
atagattctgttatacatctggctgcagagagtcatgtagaccgatctataactgatccg
ttctcttttgcccgtacaaatataatgggtactctaaatcttttacaggctgccagagag
tattggaacaatgatttcagcaataaactgttttatcatgtgtctactgatgaggtatat
ggatcacttgaatttggagagcatccatttactgagactacatcttatgatccacactca
ccatattcagcttcgaaagcatcttcggaccatttcgtcagagcttatagggatacatat
gggctgccaatagtaatctctaactgttccaacaattatggaccttaccagtttcccgaa
aaacttattccattatttataaataatattcgtcacaataaaccattgcctgtctatggt
aagggagagaatgtaagagactggctgtatgtagaggatcatgccaaagcaattgatgta
atatttcacaaaggtaaacgaggggatacatataatattggaggactcaatgagtggaag
aatattgacctgattcatcaggttgtgaaagtttgtgataaactattagggagagcagaa
ggtgagtcagaaaaacttataacctatgttaccgatagggccggtcatgatttgcgttac
gctattgatgcgactaaactgacttccgagcttggttggaaaccatcacttcagtttgag
gaagggcttgagaagacagttagatggtatcttgacaatcaggactggcttgatcatgta
actagtggtgaatacatgaactattataaacaaatgtatggcgaatag
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