Fermentimonas caenicola: ING2E5B_1002
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Entry
ING2E5B_1002 CDS
T03818
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pbt
Fermentimonas caenicola
Brite
KEGG Orthology (KO) [BR:
pbt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbt03016
]
ING2E5B_1002 (truB)
Enzymes [BR:
pbt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ING2E5B_1002 (truB)
Transfer RNA biogenesis [BR:
pbt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ING2E5B_1002 (truB)
Prokaryotic type
ING2E5B_1002 (truB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruD
Motif
Other DBs
NCBI-ProteinID:
CEA15755
UniProt:
A0A098BYK3
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All DBs
Position
chrI:1088062..1088754
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AA seq
230 aa
AA seq
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MDFIEGEILHIDKPLHWTSFRVVSVVRAKLCRRLKIKKLKVGHAGTLDPLATGVMTICTG
KKTKSIEELQLQTKEYVADIMLGATTPSFDKETEINEVFPTEHITRELIEDKLKLFVGEI
DQVPPVYSAVMVDGKRAYEYARKNENIELKPKKLVIDSIELISCNIPNITIRVVCSKGTY
IRALARDIGEALGSGAHLTGLVRTRVGDITLADCLKMDEIDRFIEDHIII
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggattttatcgaaggagagatattgcatatcgataaaccattacattggacatcgttc
cgtgtagtgagtgttgttagagcaaaactttgtcgaagattgaaaatcaagaagcttaaa
gtgggccatgcgggtaccttagatcctttggcaactggagtaatgacaatttgtactggt
aaaaaaacaaaatctattgaagagcttcaattgcagactaaagaatatgttgcagatata
atgctgggtgctacaactccatcatttgacaaagaaacagaaattaatgaggtattcccc
acagagcacataaccagagagttgatagaggacaaattaaagctttttgtgggagaaatt
gatcaggtgccacctgtttattctgctgtaatggtagatggaaaaagagcttatgaatat
gcgcgaaaaaatgaaaatattgaactaaaaccaaaaaaattggttatagatagtattgaa
ttgatttcttgcaatatcccgaacataacaattagagtggtatgtagcaaaggtacatat
atcagagcgcttgccagagatattggtgaagctttgggttcgggtgcacacttaacaggt
ttggttcgtacaagagtaggggatattactcttgctgattgcttgaaaatggatgagatt
gatcggtttatagaagatcacataataatataa
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