Fermentimonas caenicola: ING2E5B_1017
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Entry
ING2E5B_1017 CDS
T03818
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pbt
Fermentimonas caenicola
Brite
KEGG Orthology (KO) [BR:
pbt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbt03032
]
ING2E5B_1017 (gyrA)
03400 DNA repair and recombination proteins [BR:
pbt03400
]
ING2E5B_1017 (gyrA)
Enzymes [BR:
pbt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ING2E5B_1017 (gyrA)
DNA replication proteins [BR:
pbt03032
]
Prokaryotic type
DNA Topoisomerases
ING2E5B_1017 (gyrA)
DNA repair and recombination proteins [BR:
pbt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ING2E5B_1017 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
CEA15770
UniProt:
A0A098BYL7
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Position
chrI:complement(1102382..1104988)
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AA seq
868 aa
AA seq
DB search
MIDQEDRIIKINIEDEMKSSYIDYSMSVIVSRALPDVRDGFKPVHRRILFGMSGLGNTPD
KPHKKSARIVGEVLGKYHPHGDSSVYFAMVRLAQEWNMRYTLIDGQGNMGSVDGDSPAAM
RYTEARLNRLAEEMLRDIDKDTVDFQLNFDDTLSEPTVLPSRIPNLLINGSSGIAVGMAT
NMAPHNLTECINGIIAYIDNRDIDIKGLMKYIKAPDFPTGAYIYGYKGVEDAFETGRGRV
VMRGKADIESGKTHDKIVITEIPYLVNKAALIKNIADLVADKKIEGISNVNDESDRRGMR
IVVDIKRDGNANVVLNKLYKFTALESSFSVNNIALVNGKPELLNLKQLISYFVDHRHDVV
TRRTQFELRKAEERAHILEGLIIASDNIDVVISIIRSSSSPQTAIQSLMERFELSEIQAR
AIVEMRLRQLTGLEQDKLRSEYEEIQKLIARLNEILNNEDVLMQVIKDELIEIREKYGDE
RRSEIIFSAEEMSMEDFYSDDEMIITISHLGYIKRTPLAEFHTQNRGGVGAKGTDTREED
FVEYIYPATMHNYMLLFTKKGKCYWLHVYEIPEGTKNSKGRAIQNLLNIDPDDSVTAFVR
VDNLTDEEYINSNYLIFCTEQGIIKKTQLEAYSRPRQNGVNAITIKEGDQVISVRLTNGN
QHIILANRNGRAIRFDENDVRPMGRTATGVKGMTLDDDGEDIVIGMICMSPQSENSILVV
SEQGYGKRTKLNDEDGEPIYRITRRGGKGVKTLNITEKTGKLVAIKSVTEDNDLMIINKS
GITIRMNISDIRIMGRATQGVRLINLEKRNDQIASVCKVDSEDTDDEIVELDKKEEIETF
DVQYQDVDVEVDDDQEPLDDQDLDNDLE
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgattgatcaggaagatagaatcatcaagattaatatcgaagatgaaatgaaatcatcg
tacatcgattactcgatgtcagtgattgtgtctcgtgcattgccggatgtaagagatggt
tttaaaccggtacacagacgaatactatttggaatgtcaggacttggaaatactcctgat
aagccgcataaaaaatcagcaagaattgtgggtgaagtattgggtaaatatcaccctcat
ggtgactcatctgtatatttcgctatggtgcgtctggcccaggagtggaatatgcgttat
acactgatagacggacagggtaacatgggtagtgttgacggagatagtcctgctgctatg
cgatatactgaagcaagattaaataggcttgctgaagagatgttgcgtgatattgacaaa
gatacagttgattttcagctcaactttgatgatactttgtcagaacccacagtattacca
tccagaatacctaatttgctgatcaacggatcttcaggtattgctgttggtatggctact
aatatggcccctcacaaccttacagagtgtattaacggtattattgcatatatagacaac
agagatatagacataaagggtttgatgaaatatatcaaagcccctgatttccctaccggt
gcctatatttatgggtataagggtgttgaagatgcatttgagactggtagaggacgtgtt
gtcatgcgcggtaaagcagatattgaatctggtaagacacatgataaaatagttattaca
gaaattccatatctggtaaacaaagcagcactaattaagaatatagctgaccttgttgca
gataaaaagattgaaggaatttctaatgttaatgacgagtctgacaggcgtggaatgcga
attgttgttgacatcaaacgtgatggtaatgcaaatgttgtattaaacaaactatataag
tttactgctcttgaatcttcatttagtgtaaataatattgctctggtaaatggcaaacct
gaactgttgaatcttaagcagttgatctcatattttgttgatcatcgacatgatgttgtc
acacgtcgcactcaatttgaattacgtaaagcagaagagagagctcatatattagaagga
ttaattattgcttcagataatattgatgtagtaatatcaattattcgtagttcttctagt
cctcaaacagcaattcaaagtttgatggagaggtttgaactttctgaaattcaagctcgt
gcaattgttgaaatgaggttaagacagttgactggcttagaacaggataaactacgttct
gaatatgaagagatacaaaaactgatagcccgtttaaatgaaatccttaataatgaggat
gttctgatgcaggttattaaagatgaactgattgaaatccgtgagaaatatggcgatgag
cgtcgttctgaaataattttctctgcagaggagatgagcatggaggatttttattctgat
gatgaaatgatcattactatttcacacctgggatatattaaacgtacaccacttgctgaa
tttcatactcaaaaccgaggaggagtaggggctaaaggcacagatacccgagaagaggac
tttgttgaatatatttacccggctacaatgcataattatatgcttctgtttaccaaaaag
ggtaaatgttattggttacatgtatacgaaattcctgaaggaactaaaaattctaaaggt
cgtgcaattcagaatcttcttaatattgaccctgatgactctgtaacagcttttgtgaga
gtagataatcttactgatgaagaatatatcaattcgaactatttgatattctgtacagaa
caaggtattattaagaaaactcagcttgaagcttattcgagaccgcgtcagaatggagtt
aatgcaattaccattaaagaaggagaccaagtaatttcggtaagattaactaatggtaat
cagcatattatacttgcaaatagaaatggtcgtgctatccgttttgatgagaatgatgtt
agaccaatgggaagaactgctaccggtgttaaaggtatgactcttgacgacgatggtgag
gatattgtaattggaatgatttgcatgagtcctcaatcagaaaattctatactggttgtt
tctgaacagggttatggtaaaaggactaagctaaatgatgaagacggagaaccgatatat
cgaataacccgtaggggaggtaaaggtgttaaaacattgaatattactgaaaagacggga
aaacttgttgcaatcaaaagtgttacagaagacaacgatttaatgattattaacaagtcg
ggtataacaatacgtatgaatatttccgatattcgcatcatgggacgcgctactcagggt
gttcgtctgataaatttggagaaaagaaacgatcagatagcatcagtatgtaaggtggac
tcagaagataccgatgatgaaatagtggaactcgataaaaaggaagaaatagaaacattt
gatgttcagtatcaggacgtagatgtggaagtggatgatgaccaggaacctttagatgat
caggatcttgataatgaccttgaataa
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