Fermentimonas caenicola: ING2E5B_1023
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Entry
ING2E5B_1023 CDS
T03818
Symbol
serS
Name
(GenBank) Serine-tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
pbt
Fermentimonas caenicola
Pathway
pbt00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pbt00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
ING2E5B_1023 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pbt01007
]
ING2E5B_1023 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbt03016
]
ING2E5B_1023 (serS)
Enzymes [BR:
pbt01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
ING2E5B_1023 (serS)
Amino acid related enzymes [BR:
pbt01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
ING2E5B_1023 (serS)
Transfer RNA biogenesis [BR:
pbt03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
ING2E5B_1023 (serS)
Prokaryotic type
ING2E5B_1023 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
tRNA-synt_2d
Muted
DSX_dimer
CENPH
23S_rRNA_IVP
LUC7
Prominin
ISG65-75
CENP-F_leu_zip
CUPID
Motif
Other DBs
NCBI-ProteinID:
CEA15776
UniProt:
A0A098C033
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All DBs
Position
chrI:complement(1113229..1114500)
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AA seq
423 aa
AA seq
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MLTLKVINENPGEVISRLKKKNFDAKEIVEKIIELDAIRRNSQTSLDGVLSEINSISKSI
GSLIKEGKKDEATSAREKVATLKESSKELEATLKDAQDKIEELLVTIPNLPHESVPEGKS
AEDNLIERNGGVMPSLEKDALPHWDLAKKYDLIDFELGVKITGAGFPVYKGKGARLQRAL
INFFLDNARDAGFMEVQPPYVVNSDSGFGTGQLPDKEGQMYHVGLDDLYLIPTAEVPVTN
IYRDVILEDKDLPVKNTAYSACFRREAGSYGKDVRGLNRLHQFDKVEIVCIDKPENSYAR
LDEMVSYVQTLVEKLELPWRILRLCGGDMSFTSALTFDFEVYSAAQERWLEVSSVSNFES
YQANRLKCRYRDENRKTQLCHTLNGSALALPRILAALLENNQTSEGIRIPKVLVPYCGFD
IID
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcttacacttaaagtaataaacgaaaatcccggggaggttataagtcgtcttaagaaa
aaaaacttcgacgctaaagagattgttgagaagattattgagcttgatgctattagaagg
aacagtcaaacttcacttgatggagttttatcggaaataaactcgatatcaaaatctatt
ggatcgcttattaaagagggcaagaaagatgaagctacttcggccagagagaaagtagcc
actcttaaagaatcttctaaagagcttgaagcaaccttgaaagatgcacaggataagata
gaagagctactagttacaattcctaacctgccgcatgaatcagttccggagggtaaaagt
gctgaagataatctgattgaacgtaatggtggtgtaatgccatcattagagaaagatgcc
ttacctcactgggatctggccaagaaatatgatctgattgattttgagcttggcgtaaag
attactggtgcaggatttcctgtttataaaggaaagggtgcaagactacagagggcttta
atcaatttcttcctggataatgcacgtgatgcagggtttatggaggttcaaccaccctat
gttgtaaatagtgattcaggattcggtacaggtcagctacctgataaagaggggcaaatg
tatcatgttggacttgatgacctctacttaattcctacagctgaagtccctgttaccaac
atttacagagatgtaatccttgaagacaaggatctgccagtaaaaaacactgcatattca
gcatgcttcagaagagaagccggttcttatggtaaagatgtacgtggacttaaccgtctg
catcagtttgataaggttgaaattgtttgtattgataaacctgaaaactcatatgcgcga
ctggacgaaatggtttcttatgtgcagacactggttgaaaaacttgaactgccatggcgt
atacttcgtttatgcggtggtgatatgagttttacttcagcacttacattcgacttcgag
gtatattcagcagctcaggaacgctggcttgaagtaagttctgtttcaaacttcgaaagc
tatcaggcaaaccgactgaaatgtcgttatcgtgatgaaaaccgcaaaacacaactttgt
cacacactaaatggaagcgcactggcactgccacgtatattagcggcattgctggaaaat
aatcaaacgtctgaaggtattagaattcctaaagtactggtaccatattgcggatttgat
attatagactaa
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