Fermentimonas caenicola: ING2E5B_1408
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Entry
ING2E5B_1408 CDS
T03818
Symbol
clpC
Name
(GenBank) putative ATP-dependent Clp protease ATP-binding subunit
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
pbt
Fermentimonas caenicola
Brite
KEGG Orthology (KO) [BR:
pbt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pbt03110
]
ING2E5B_1408 (clpC)
Chaperones and folding catalysts [BR:
pbt03110
]
Heat shock proteins
HSP100
ING2E5B_1408 (clpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_16
AAA_22
Sigma54_activat
ATPase_2
nSTAND3
AAA_14
IstB_IS21
UVR
AAA_7
TniB
RsgA_GTPase
bpMoxR
AAA_3
NACHT
ResIII
RNA_helicase
Mg_chelatase
Roc
AAA_24
Torsin
AAA_29
DUF815
Zeta_toxin
T2SSE
AAA_25
SRP54
LRIM1_dimer
DNA_pol3_delta2
Methyltransf_15
ABC_tran_CTD
NBD_SMAX1
Motif
Other DBs
NCBI-ProteinID:
CEA16156
UniProt:
A0A098C158
LinkDB
All DBs
Position
chrI:1558843..1561392
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AA seq
849 aa
AA seq
DB search
MDNNFSQRVRDIMAYSREEAGRLQNNYIGPEHLMLGILRDGDGLAIQVLQDFDIDLHVLK
DYIDSHVRSIQEPYDGTSELVINKNTEKALKMSILEARLTKSIETDTEHILLALLKEKNT
LIYDILKQFQLDYSSAFMYIKSILENRSEEDLDEADSPVSGPNFTDDDDEDMNDKSFNPG
GAQGTSQTKNSSSDTPVLDNFGTDITRAAIENRLDPVVGREKEIERIAQILSRRKKNNPV
LIGDPGVGKSAIVDGLALRITQKKVSRALFDKRVIALDMASIVAGTKYRGQFEERIKAIL
NELSKNPNIILFIDEIHTIVGAGGAAGSLDAANMLKPALARGEIQCIGATTLDEYRKNIE
KDGALERRFQKVIVDPTTSEETLQILRNIKERYEDHHNVRYTDEALKACVKLTERYVTDR
TFPDKAIDALDEAGARVHISNIVIPETIERLEEELKEVEQQKTDAVKAQKYELAASFRDK
QRQLLLALEAEEERWQKEIKEKPEIVDEEKIAEVVAMISGVPVQRIAEAEGHRLLQMKDV
LKSKVIGQDEAVDKVVRAIQRNRVGLKDPNKPIGTFMFLGPTGVGKTHLAKKLAQFLFDS
SENLIRIDMSEYMEKFNVSRLVGAPPGYVGYEEGGQLTEKVRRRPYSVVLLDEVEKAHPD
VFNLLLQIMDEGHVTDSLGRKIDFRNTILIMTSNIGTRQLKDFGRGVGFTTYSDVSDAEF
SRSVIQKALNKAFAPEFLNRVDDIVMFDQLSKESIYKIIDLELEGLYKRIGDLGFKINLT
ETAKEFIANKGYDIQFGARPLKRAIQKYIEDELAEKIISTGMKEGDTVIIDFDEEKQQII
MNKAEKVLE
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggataataacttttcacagcgcgttagagacattatggcatatagtcgtgaagaagcc
ggtcgtctccagaacaattacatagggccagagcatttaatgcttggtatacttcgtgat
ggagatgggttagctatacaagtacttcaggattttgatatagatctccacgtcttaaaa
gattatatagattcacatgttcgttctattcaggagccatatgatggaactagcgagctt
gtaataaataaaaataccgagaaggctttaaaaatgagtattctcgaggcacgtcttact
aaaagcattgaaacagatacagaacatatattacttgcacttttaaaggagaaaaatact
ttgatatatgatattcttaaacagtttcaactggattactctagtgcatttatgtatatt
aaaagtattcttgaaaacagaagtgaggaggatttagatgaagctgattctccagtatca
ggaccaaatttcacggatgatgatgatgaggatatgaacgacaaatcgttcaatcctggt
ggtgcacagggcacttctcaaacaaaaaacagctcatctgacacacctgtacttgataac
tttggaactgatattacacgcgctgccatagaaaacagacttgaccctgttgttggtcgc
gagaaagagatagagcgaattgctcagatactcagcaggcgtaagaaaaacaatcctgta
cttattggtgacccgggagtaggtaaatctgcaatagtagatggattagctctcagaatc
acacagaagaaggtttcacgtgcactattcgataagagggtaatagctctagatatggct
tcgatagtggcaggcacaaaatatcgcggacaattcgaagagcgtattaaagctatactg
aatgaactttccaaaaacccgaacatcattctgtttattgatgaaattcacacaatcgtt
ggtgcgggaggcgcagcaggatctctggatgcagccaatatgctgaaacctgcacttgcc
agaggtgaaatacagtgtattggagcaacaactttggatgaatataggaaaaatattgaa
aaggatggtgctctggaacgtcgtttccagaaggttatagtagaccctactacatcggag
gaaacattgcagatattgagaaatattaaggaaagatatgaagatcatcataatgtgaga
tacacagatgaggcattaaaagcttgcgtgaaactcactgagcgttatgttacggatcgt
acattccctgataaagctattgatgcattagatgaagccggggcaagagttcatatttca
aatattgttatacctgagacaatagagcgactggaagaggagcttaaagaggttgaacaa
caaaaaactgatgcagttaaagctcaaaaatatgaactggcagctagtttcagggataaa
caacgtcagttacttctggctcttgaggcagaagaggaacgttggcagaaagagattaaa
gagaagccggaaattgtagatgaggaaaaaatagcagaagtggtagctatgatttcaggt
gtacctgtacaacgaattgctgaggcagagggacatagattgcttcaaatgaaggatgtc
ttaaagagtaaagtaataggtcaagacgaagccgtagacaaggtagtaagagctatacag
cgtaatagggttggtcttaaagatccaaataaacctattggtacttttatgtttcttgga
ccaaccggtgttggtaaaactcacttggcaaaaaaacttgcacagtttctctttgattca
tctgagaatctcatccgaattgatatgagtgagtatatggaaaaatttaatgtttccagg
cttgtaggagctcctccgggatatgttggatatgaggaaggtggtcagctgactgagaaa
gtacgtcgcagaccatactctgtagtactgctggacgaggttgaaaaggctcaccccgat
gtatttaatctcttgcttcagattatggatgaaggtcatgtaacagatagcctgggtcgt
aaaatagacttcagaaacactattctgattatgacgtctaatattggcacacgtcagctg
aaggatttcggacgaggagtaggtttcaccacatatagtgatgtaagtgatgcagaattc
tcacgcagtgttatccagaaagctcttaataaagctttcgccccagagtttttaaacagg
gtggatgatattgtaatgtttgatcaactaagtaaagagtctatatataagattattgac
ctggaattggaaggactttataaacgtatcggagatcttggattcaagataaatcttact
gaaactgctaaagaatttattgctaataagggatatgatatacaatttggtgcaagacct
cttaagagagctatccagaagtatatagaagatgagttggcagaaaaaatcattagtaca
ggtatgaaagaaggagatactgttatcattgattttgatgaagaaaaacagcagataata
atgaataaagcagaaaaggttctggaataa
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