Fermentimonas caenicola: ING2E5B_2061
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Entry
ING2E5B_2061 CDS
T03818
Name
(GenBank) hypothetical protein
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pbt
Fermentimonas caenicola
Pathway
pbt03030
DNA replication
pbt03430
Mismatch repair
pbt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ING2E5B_2061
03430 Mismatch repair
ING2E5B_2061
03440 Homologous recombination
ING2E5B_2061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbt03032
]
ING2E5B_2061
03400 DNA repair and recombination proteins [BR:
pbt03400
]
ING2E5B_2061
Enzymes [BR:
pbt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ING2E5B_2061
DNA replication proteins [BR:
pbt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ING2E5B_2061
DNA repair and recombination proteins [BR:
pbt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ING2E5B_2061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
At5g48480-like_N
DUF6282
Motif
Other DBs
NCBI-ProteinID:
CEA16790
UniProt:
A0A098C1K6
LinkDB
All DBs
Position
chrI:2337077..2340817
Genome browser
AA seq
1246 aa
AA seq
DB search
MQPFVHLHVHSQYSLLDGQASIARLVDKAHGDGMKAIALTDHGAMYGIKEFLNYVNKKNS
PVKSEINKIKSEIKKLESTEGDSDQIKQLKAKLTETEKKLFKPIVGCECYLARRDRFQMS
DKVDGSGWHLVVLAKNLKGYKNLIKIVSKSWTEGFYYRPRIDKELLEKYSEGLIVSSACL
GGEISRKVDNGQINEAEEAVQWYKRVFGDDYYIELQRHKTDRPDADQTTYPKQQKVNEEL
IRIARKYDVKLIATNDVHFVNEEDADAHDRLICLSTGRDFDDPDRMRYSKQEWLKTTAEM
NQVFADIPEALSNTLEIADKVEFYSIDNPPLMPFYPIDPEFGTEEQYKQKYSEQDLIDEF
GEDTFHRLGDYDKVIRVKLESDYLTHLTKKGAQMRYGENLNDEIIDRLKFELDTIKNMGF
PGYFLIVQDFISAAREMDVAVGPGRGSAAGSAVAYCLRITDIDPLKYNLLFERFLNPDRI
SMPDIDIDFDDEGRGKVLRWVTEKYGNEKVAHIITYGTMATKMSIKDVARVHKLPLAESN
RLAKLVPDRIPNKKLNLGNAIEFVPELKEAAESSDPLVSDTLKYAQMLEGNVRSTGVHAC
GVIIGQTDISDVVPISTAEDKETKEKLLVTQFEGSVIEETGLIKMDFLGLKTLSIIKDAI
TNIEINRGVKINIDEIDMEDKKTYQLYCNGQTTGTFQFESAGMQKYLKELQPSKFEDLIA
MNALYRPGPMEYIPEFIRRKHGREEISYDLPIMEKYLSETYGITVYQEQVMLLSRLLADF
TRGQSDELRKAMGKKQIDKMMALKEKFLSGGKKNGYDEKSLNKIWVDWEKFASYAFNKSH
ATCYSWVAYQTAWLKANYPSEYMAAVLSNNLNNITEITKFMDECKAMGINVLSPDVNESL
LKFSVNKEGDIRFGLGAIKSVGQGAVNDIIEERNKNGQYKDIFDFVERVNLSSVSRKIIE
ALALAGGFDSLPNIKREQFFARNSKDEEFIDTLIRYGSKYQMDKMEAMTSLFGDDTSFLI
SRPEIPNTGRWSDMERLNKERELIGIYLSAHPLDDYEFILKYVCSADTLKLQDLDALNGR
DITFGGMVTVVREGQTKRGSPYTIFKIEDYYGSFEIALFSEDSVNFSKYARIGLALYIQA
KVQPKRFRPDELEVKISSINLLSEMKDKLVNKITLQIPLTELDDTVVTELSALVKNNYGN
SLLYFNIIGEESHMNIQLFSRSTKIQVNKRFIDYLKDNLLIDFKIN
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccatttgtacatttacacgttcactctcaatattcgttgctcgacgggcaggca
agtatcgcacggctggtagataaagcccacggcgatggcatgaaggctattgcacttacc
gaccatggggcaatgtatggtattaaggagtttctcaactatgtaaataaaaaaaactca
cctgtaaaatcagaaataaacaaaattaaaagtgagataaaaaaattggagagcactgaa
ggagatagtgatcagattaagcagctgaaagccaaactgactgaaacagaaaaaaaactt
tttaaacctatagtgggatgcgaatgttacctggcacgcagggacaggtttcagatgagt
gataaggttgatggaagcggatggcacctagtggtgctggccaagaacctaaagggttat
aagaacctgatcaagattgtttcgaagagctggacagaaggtttttactaccgtccacgt
atagataaagagctgctggagaaatacagtgaaggattgatagtttcatccgcctgcctt
ggtggtgagatatcaagaaaggttgataacggtcagattaacgaagctgaagaggctgta
cagtggtacaagagggtattcggcgatgactattatattgagcttcaacgccataagact
gatcgtccggatgctgatcagaccacctatccaaagcagcaaaaggtgaatgaggagctg
ataagaattgcaagaaaatatgatgtcaagctgattgctaccaacgacgtacactttgtg
aacgaggaggatgcagatgcgcatgaccgactgatatgcttgagcaccggcagggatttt
gatgaccctgacagaatgaggtattctaaacaggagtggcttaagactaccgctgagatg
aatcaggtttttgctgatattcccgaggctttatcaaacactcttgagattgcagacaag
gttgagttttattcaatcgataatcctccgctgatgcctttctaccctattgaccctgaa
tttggtactgaagagcagtataagcagaagtacagcgaacaggatcttattgatgaattt
ggagaggatacattccatcgtctgggtgactatgacaaagtgatacgagttaagttggag
tcggattacctcacccaccttacaaaaaaaggagcccagatgcggtatggcgagaatctt
aatgatgagattattgatcgactgaagtttgagcttgacacaataaagaatatggggttc
cccgggtatttcctgattgtacaggatttcataagtgcagcaagggagatggatgttgca
gttggaccgggtcgcggttcagcagctggttcagccgttgcatactgtctcaggattaca
gatatcgacccactaaaatataacctcctttttgagcgtttcctgaatcccgaccgtata
tctatgcctgatatcgatatcgactttgatgatgaaggtagaggcaaagtgcttagatgg
gtaactgaaaaatatgggaatgagaaggttgcacatattattacttatggcactatggca
acaaagatgtcaatcaaggatgttgccagggttcacaagctaccccttgcagagtcgaac
agactagctaagcttgtacctgacaggataccgaataaaaagctgaacctgggtaatgca
atcgagtttgtacctgaactcaaagaggctgcagagagcagcgaccctctggtgagcgat
acgttaaagtatgctcagatgcttgagggtaatgttagaagtaccggagttcatgcatgc
ggtgttattattggacagaccgacatatcggatgtagtgcctattagtactgctgaagat
aaggagaccaaagagaagcttctggttactcaatttgaaggctctgtgattgaggagaca
ggtctgataaagatggactttctggggctcaagactctttctattataaaagatgctatc
accaatatagaaataaaccgtggcgtaaagatcaacattgatgagattgatatggaagat
aaaaagacatatcaactctattgcaacggacagactaccggaacatttcagtttgagtct
gccggtatgcagaagtacctgaaagagcttcagccaagcaagtttgaggacttgattgcg
atgaatgccttatatcgccctggtccgatggaatatatacctgagtttatcaggcgtaag
catggaagggaggagatcagttacgacctcccgattatggagaaatacctgagtgaaacg
tatggtattacggtttatcaggaacaggtgatgcttctgtcgagattgcttgccgacttc
acccgtgggcagtcggacgagctgcgcaaagcgatgggaaagaagcagatcgacaagatg
atggcccttaaggaaaagttccttagtggcggaaaaaagaatggctatgatgagaaatcg
ctgaataagatttgggtcgactgggaaaagtttgcttcttatgcatttaacaaatctcat
gctacttgctactcatgggttgcatatcagactgcctggttaaaagctaactacccttct
gagtatatggctgcggttctctcaaacaacctcaacaatattactgagatcacaaagttt
atggatgagtgcaaggcaatgggtatcaatgtgctttcgcccgatgttaatgaatctctc
ctaaaattctctgtaaacaaagagggtgatatccgttttgggcttggtgcaattaaaagt
gttggtcagggtgctgtaaacgatattattgaggaacgaaataaaaacggtcagtacaaa
gatatatttgactttgttgaaagggtaaacctatcatcagtgagccgtaagattattgaa
gcgctggcacttgcaggcggatttgattctttgccaaacattaaacgagaacagtttttt
gctcgaaacagcaaggatgaggagtttatagacactttaatccgttatggcagtaagtac
cagatggacaaaatggaggcaatgacctctctgtttggtgatgacacttcatttctgata
tcacgtcccgagatacccaataccgggaggtggtcggatatggagcgactgaataaggag
cgtgagttaattggcatctatctgtctgcacatccacttgatgattatgagtttatactg
aaatatgtgtgcagtgccgacactctgaaacttcaggatcttgacgctctcaatggaaga
gatataacttttggaggaatggtgacagtagttagggaaggccaaaccaaaagaggctca
ccatacacaatcttcaaaatagaggattattacggcagttttgagatagctctgtttagc
gaagacagtgtaaactttagcaaatatgcacgaataggactggcattatacatacaggct
aaagtacagcccaaacgattcagacctgacgagctggaggttaagataagcagtatcaat
cttttatccgaaatgaaggataaacttgtaaataagatcacgctgcaaatacctctgact
gaattagatgacaccgttgttacggaattatcagctctggtaaaaaacaattacggaaat
tcgttgttatatttcaatatcataggtgaggagtcacatatgaatatacaacttttttca
cgttcaaccaagatacaggtgaacaaacgatttatcgattatttaaaggataacctgcta
atcgatttcaaaataaattaa
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integrated database retrieval system
