Sedimentisphaera cyanobacteriorum L21-RPul-D3: L21SP3_00040
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Entry
L21SP3_00040 CDS
T04695
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
pbu
Sedimentisphaera cyanobacteriorum L21-RPul-D3
Brite
KEGG Orthology (KO) [BR:
pbu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbu03016
]
L21SP3_00040
Enzymes [BR:
pbu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
L21SP3_00040
Transfer RNA biogenesis [BR:
pbu03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
L21SP3_00040
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Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
2H-SAK
Motif
Other DBs
NCBI-ProteinID:
AQQ08264
UniProt:
A0A1Q2HLY2
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All DBs
Position
complement(57982..58554)
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AA seq
190 aa
AA seq
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MRTFVAVVPYPEVLDKIDKVQKRIAPELEHFRSDIKWVRPQDAHITLAFLGEVDDNHLQS
VCDIVRTSVTGRTDFTISVQGTGTFGKNAHTFWAGLTQGAEQMKALREAVCTPLAEKGFF
SPSKRFEPHITLARIKSPRPGRIIKSIDRSLKKQSFGSCPVESVCVFTSELTKKGPKYTV
AAQYFFAKPR
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgagaactttcgtggctgtagttccttatccagaggtgcttgataagatagacaaggtg
cagaaaagaattgctccagagctggagcatttccgcagtgatataaagtgggtgaggccg
caggatgcccatatcacgcttgcttttctcggagaagtggacgataaccacctgcagagc
gtctgcgatatcgttagaacaagcgttaccggaaggacagatttcacgatctctgttcag
ggcacgggaactttcggaaaaaacgcccatacattctgggcaggcctgacacagggagca
gaacagatgaaggctctgcgggaagcagtttgcacgccgctggctgagaagggctttttc
agcccttcgaaaagattcgaaccgcatatcactcttgccagaatcaaatctccgcgtccc
gggcgaattataaaaagcatagaccgctcactcaaaaagcagtctttcggcagctgccca
gtggaaagcgtatgcgtttttacaagcgagctaacgaagaaaggccccaaatacaccgtt
gcagctcagtacttctttgcaaagccccgataa
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