Sedimentisphaera cyanobacteriorum L21-RPul-D3: L21SP3_00527
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Entry
L21SP3_00527 CDS
T04695
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pbu
Sedimentisphaera cyanobacteriorum L21-RPul-D3
Pathway
pbu03420
Nucleotide excision repair
pbu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pbu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L21SP3_00527 (pcrA)
03430 Mismatch repair
L21SP3_00527 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbu03400
]
L21SP3_00527 (pcrA)
Enzymes [BR:
pbu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L21SP3_00527 (pcrA)
DNA repair and recombination proteins [BR:
pbu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L21SP3_00527 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
L21SP3_00527 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
PcrA_UvrD_tudor
nSTAND3
ResIII
Motif
Other DBs
NCBI-ProteinID:
AQQ08737
UniProt:
A0A1Q2HMP7
LinkDB
All DBs
Position
692882..695062
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AA seq
726 aa
AA seq
DB search
MAQSFSFDQLTPSQKEAIEHKDGPLLIIAGPGSGKTRTVTCRIARLVEKGVSPWSICAIT
FTNKAADEMKQRVREMGVPRGAQISTFHSLCVRILREFADYAGVKSTFSIYSDAEQKACI
KEVIKASNQSTKNFPPAKVLSYISNYKNDLFDPDEAVKMADGFQQKMVAKLFKRYQNRLI
QNNALDFDDLLTKTAFLIKNYPEIRKQLSDRYKYILVDEYQDTNHAQYQIAKGLALEHGN
ICVTGDPDQSIYRWRGADIRNIMAFEKDWPNAKVVKLEENFRSCPAVLELADKLISHNRQ
RKEKNLKAVRSEEKKIVFSPFEDQREEGLSIAGKINELIQQGHNPNEIAVLYRTNSMSRS
IEESFIRGKVPYLIVRGVEFYNRKEIRDMLAYLKLISNPSDSVALERIINTPPRGIGKTT
LERLKRYASNNGISLWHAATEADRVEMLSKAAAAKVIEFTKMIQGFQDFSRQDSFAVSDL
IEDIFESSGFKAALKKSSEQEDAVENIEELINNAAFFDNAQQEEDQPGGLDDYLQMISLY
SDADAYDPGSGKVSLMTLHAAKGLEFDNVFIIGLEEGILPHERSSESDSQLEEERRLFFV
GITRARLNLFISQTKYRTIWGREIRTLPSQFIFECGLKTESYTAVNDTVKDSVGSYRRTV
RDETKRSRTSSNAAYFAGQRVSHRKFGAGVVKEYLDLGENSVITVKFDKGQVKTLVQKYA
KLECLD
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggctcaatcattctcatttgaccagctaaccccatcccagaaagaagcaatagagcac
aaggatgggccgcttttgattatcgccggcccgggcagcgggaaaacacgcactgtaacg
tgccgaattgcaaggctcgtggaaaagggcgtttccccgtggagcatctgcgctattaca
ttcacaaataaagccgctgatgagatgaagcagagggttcgtgagatgggtgttccgagg
ggggctcagataagcacctttcactcattatgcgtgaggattctgcgcgagttcgctgat
tatgctggcgttaaaagcactttcagcatatattcagatgccgagcagaaggcctgcatc
aaagaagtgattaaggcgagcaatcagtcaactaagaattttccgcctgcaaaggtcctt
tcatatatctcaaactacaaaaacgacctcttcgaccccgatgaagctgtcaaaatggcg
gacggtttccagcagaagatggtggcaaaattattcaagcgataccaaaaccggctcata
cagaacaacgcactggattttgacgatctgctcactaaaacagcctttctgataaaaaat
tatcccgagattagaaagcagctcagcgacaggtataaatatatcctcgttgatgagtat
caggacacaaatcacgcccagtaccagattgcaaaaggtctcgctttggagcatgggaat
atttgcgtaaccggcgaccctgaccagtccatataccgctggcgtggggctgacataagg
aatattatggccttcgagaaggactggcctaatgctaaagtggtaaagctggaggagaac
ttccgttcctgtccggcagttcttgagcttgcagataagctcatctcccacaacaggcag
aggaaagaaaagaatctcaaggctgttcgcagtgaggagaaaaaaattgtcttttctcct
ttcgaagaccagagggaagaagggctgtctatagccggcaagatcaatgagcttatccag
cagggacacaatcccaatgaaatcgccgtgctttacagaacaaactctatgagccgctcc
atcgaggagtctttcattcgcgggaaagtcccttatcttattgtccgcggcgtggagttt
tacaatagaaaagaaattcgcgatatgctcgcatatctcaaacttatctccaacccctct
gattcggttgcacttgagcggataatcaatacaccccccagaggcataggcaaaactact
ttggaaaggcttaaacgatatgcctctaataatggcatttctctctggcatgccgcaacc
gaggcagacagggtagagatgttgagcaaagctgcggccgcgaaggtaatagaatttacg
aaaatgattcagggcttccaagatttcagcaggcaggatagctttgcggtttcggattta
attgaagatatattcgagtcttcgggttttaaagccgcactcaaaaaatcttccgagcag
gaagacgctgttgaaaatatagaagagctcataaacaacgctgccttcttcgataacgct
cagcaggaagaagaccagcccggtgggcttgatgactatcttcaaatgatttctctttac
agcgatgcagatgcatacgacccgggaagcggaaaggtttcccttatgactctccatgcc
gccaagggtttagagtttgacaatgtgtttataatcggccttgaagagggcatactcccc
catgagaggagcagtgaatcagattcgcagctcgaggaggagcgaagactcttttttgta
ggaattactagggcaaggctcaatcttttcataagccagacaaaataccggactatatgg
ggcagggaaatcaggactctgccttcgcagtttatttttgaatgcggattgaaaactgaa
agctatactgctgtaaacgatactgttaaagacagcgttggcagctatcgaagaaccgta
agagacgaaaccaagcggagccgaacctcttcaaacgcagcttactttgcaggtcagcgg
gttagtcacaggaaatttggcgccggtgtggttaaagaatatctcgatttaggcgagaat
agcgttattacagttaagttcgataaggggcaggttaaaactcttgtacaaaagtacgcc
aaacttgagtgtttggattag
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