Sedimentisphaera cyanobacteriorum L21-RPul-D3: L21SP3_00828
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Entry
L21SP3_00828 CDS
T04695
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
pbu
Sedimentisphaera cyanobacteriorum L21-RPul-D3
Brite
KEGG Orthology (KO) [BR:
pbu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbu03019
]
L21SP3_00828 (yhaM)
Messenger RNA biogenesis [BR:
pbu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
L21SP3_00828 (yhaM)
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Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_anti-codon
HD
TraI_2
Beta-sol_PIC_HAP1_IgA0_2nd
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AQQ09031
UniProt:
A0A1Q2HNX5
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All DBs
Position
complement(1088926..1089903)
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AA seq
325 aa
AA seq
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MPHEFINELKPGRTLNDIFMVTQPVLRNTSRGDLYIAMFLSDKTGKVNCRMWNASEETYQ
SLPKEGFIRVNGKTELYKDSLQIVVNRVEVIDTSEVNVADFLPATDKDIDKMYSEICEIL
SRIKDPYLKALMDEYLADEQLMENFRKAPAAVKMHHAYLGGLLEHTNNMLKAAVGILPYY
PQVQGELVVAGIFLHDLAKTEELRYALGFGYTNTGQLVGHIVQSAIWLDQKTDVLLEKGI
EPNKEIVDNLMHILVSHHGKYEFGSPKIPSTLEALMVSYLDDLDAKLNFANDAIENEQTS
DDWTTWKSFNMSAGTKFYKKKAIGK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgccccacgagtttataaacgaacttaaaccaggccgaaccctgaatgatatatttatg
gttacccagccggtgcttaggaatacatcaagaggtgatttgtacatagcgatgtttctc
tccgataaaaccggcaaggtaaactgcaggatgtggaatgcctccgaagagacataccaa
agcctgcccaaagaaggatttattagagtaaacggaaaaacagagctttacaaggactcg
ctccagattgtcgtaaacagagtagaggtgatcgacacttccgaggtgaatgtggcagat
ttcctgcctgctactgataaagacattgacaagatgtacagcgagatatgtgagattctt
tcaaggataaaagacccgtatctgaaggctttgatggatgagtatctcgcagacgagcag
ctgatggagaatttccgcaaggcaccggccgctgtaaaaatgcatcacgcctatctggga
ggtttgctggagcatacgaataatatgctcaaagcggcagtagggattcttccgtattat
ccgcaggtgcagggcgagctggtagtggcggggattttcctgcacgacttagccaaaaca
gaggagctcagatacgccctcggattcggctatacaaacaccggccagcttgtaggccat
attgtgcagtctgcaatatggctcgatcagaaaacagatgtcctgcttgagaagggcatt
gagcctaataaggaaatcgttgacaacctcatgcacatcctcgtatcccatcacggtaaa
tatgaattcggttcgcccaaaattccttcaactctcgaagcacttatggtgagctatctg
gacgatttagacgctaagctcaattttgccaacgatgccatcgaaaacgaacaaacctcg
gacgactggacaacatggaaatcgttcaatatgtctgcgggaacgaaattctacaagaaa
aaggccattggaaagtga
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