Sedimentisphaera cyanobacteriorum L21-RPul-D3: L21SP3_00855
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Entry
L21SP3_00855 CDS
T04695
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pbu
Sedimentisphaera cyanobacteriorum L21-RPul-D3
Pathway
pbu03030
DNA replication
pbu03430
Mismatch repair
pbu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L21SP3_00855
03430 Mismatch repair
L21SP3_00855
03440 Homologous recombination
L21SP3_00855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbu03032
]
L21SP3_00855
03400 DNA repair and recombination proteins [BR:
pbu03400
]
L21SP3_00855
Enzymes [BR:
pbu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L21SP3_00855
DNA replication proteins [BR:
pbu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L21SP3_00855
DNA repair and recombination proteins [BR:
pbu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L21SP3_00855
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_delta2
HP_1247_M
Motif
Other DBs
NCBI-ProteinID:
AQQ09057
UniProt:
A0A1Q2HNN1
LinkDB
All DBs
Position
complement(1125471..1126463)
Genome browser
AA seq
330 aa
AA seq
DB search
MAKAQTKTKLSPVYAVVGKDSFLVNKDCDKLVNSLIPPESQEMGLVVLDPDKTQASEVLD
ELRTPAFLADRKVVLIRQADNFISSNSELLIKYLDSPASKGILVLTASALRSNTRIAKKI
KSAGDLRQVSKPSFKEIVSYPSEYAKANCGKKLSAATGRLIIEFAGEEPQMIANEVEKLA
VYTGDRDTITDQDVEALCGANRTFGVFNVIDAMSSGQAGQAVSRLRNLFASDKDAEYTAV
GAFAFHFRRMFKAKAMLGKGESEAGAGQALGIRYKRQEFFRGLRNWPLVNIAEVIQALRR
IDYQSKTGQARVKVEIEQLVVKAASRNRKR
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagcacagaccaaaacaaaattatcgccggtttacgcagttgtgggcaaggat
tcctttcttgtaaacaaagattgtgataagcttgtgaactcccttatcccccctgagtct
caggagatggggcttgttgttttagaccccgataagactcaggcctctgaggttctcgat
gagctcagaaccccggcatttcttgccgataggaaggttgtgctgataaggcaggcggat
aattttatcagctccaattcagagcttctgataaaatatcttgattcgccagcctctaag
ggcattcttgttctcacggcttctgctctgaggagcaatacgagaattgccaaaaagata
aaatctgccggcgatttgaggcaggtcagcaagccctcattcaaagagatagtttcttat
ccttccgagtatgcaaaggcaaactgcggcaagaaactctccgcagcaaccggtcggctt
atcattgaatttgcgggcgaagagcctcagatgatagcaaacgaggttgaaaagctcgct
gtttatacaggcgatagagataccattacagaccaggacgtagaagccctctgcggggcg
aacagaaccttcggggtgtttaatgttattgatgcgatgtccagcgggcaggcggggcag
gcagtgagcagactgaggaatctattcgcctcagataaagacgcagaatacacagcggta
ggcgcgtttgcgtttcatttcaggcgtatgtttaaggccaaggctatgctgggcaaaggc
gaaagcgaggctggagcggggcaggctctgggcataagatacaaacgccaagagtttttc
agaggactgagaaactggcctttagtgaatatcgcagaggttatacaggctcttagaagg
atagactaccagagcaaaaccggccaggcgagggtgaaggtggaaattgagcagcttgtt
gtaaaggcggcaagcaggaacagaaaaagatga
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