Sedimentisphaera cyanobacteriorum L21-RPul-D3: L21SP3_01180
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Entry
L21SP3_01180 CDS
T04695
Symbol
uvrB
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
pbu
Sedimentisphaera cyanobacteriorum L21-RPul-D3
Pathway
pbu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pbu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L21SP3_01180 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbu03400
]
L21SP3_01180 (uvrB)
DNA repair and recombination proteins [BR:
pbu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L21SP3_01180 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
L21SP3_01180 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
AAA_16
Kinesin
TrwB_AAD_bind
AAA_7
AAA_19
HerA_C
AAA_25
AIB
HAD_Pex22
DUF87
Motif
Other DBs
NCBI-ProteinID:
AQQ09376
UniProt:
A0A1Q2HQ43
LinkDB
All DBs
Position
complement(1495419..1497404)
Genome browser
AA seq
661 aa
AA seq
DB search
MDNFNLKSQYNPSGDQPEAIRKLVEGISSGSRHQVLLGATGTGKTFTMANVIETVRKPAL
IISHNKTLAAQLYEEMKELFPENAVEYFVSYYDYYQPEAYIPQRDIYIEKDASRNDDLDR
LRLAATTSLLTRDDVIVVSSVSCIYGLGSPEEYKKNVVPVVKGDIIERDDLLGRFADVLY
ERNDIDFTRGTYRVRGDVVEVWPSYESYAVRVEFFGDEIESIKYINPVSGEALAEEQQVF
IYPAAHYIMAQDRVQTALESIQQELDQRLAEFREQGKLLEAQRLEARTKYDMEMIAEVGF
CSGIENYARHLAGLRPGAKPYTLLDYFPKDFIMFIDESHVTLPQVRAMYAGDRNRKQVLV
DHGFRLPSAMDNRPLRFDEFEQRPGRTVYVSATPGDYELGLTGGEIVEQIIRPTGLLDPK
VEVRPASSQVSDVKSEIYERVEAGQRVLVTVLTKRLAEDLTDFFQKEKIKCRYLHSEIDA
IERVDILRDLRKGEFDVLIGINLLREGLDLPEVAMVAIMDADKEGFLRSETSLIQTIGRA
ARNVDSRVILYGDKVTPSMKRAMDETERRRKIQMEYNKKHNITPETIRKSIRTALSDSLK
ARKTARQAVSMDEKEYDKTEMVAMLEKEMMKAAEELNFEKAAKLRDKIKEFESMPKIEKK
K
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggacaacttcaacttaaaaagtcaatacaacccttcaggcgaccagcccgaggcaatc
cgaaagcttgtggaagggataagctcaggcagccgccatcaggttctcctcggcgctacg
ggtacgggcaaaaccttcacaatggcaaatgtgattgaaacggtgaggaagcctgcgctt
attatctcgcacaacaaaactcttgcagcacagctttatgaggaaatgaaggagctgttt
ccggaaaatgcggttgagtatttcgtcagctactacgattattaccagcctgaggcctat
atacctcagcgggatatatacatagagaaggatgcaagcagaaacgacgatctcgaccgt
ctccgccttgcagcaacaacaagccttctcacccgagacgatgtgattgtggtatccagc
gtttcatgcatctacggcttaggctcgccggaggagtacaaaaagaacgttgtgcctgtg
gtgaaaggcgatattatcgaacgcgacgatcttctcggacgctttgcagatgtcctctat
gaacgaaatgatatagatttcactcgagggacatacagggttcggggcgatgtggtggag
gtttggccttcttacgagtcttacgctgtccgagtggaattcttcggcgatgagattgag
agcataaagtatataaatcccgtatccggcgaggctctcgcagaagagcagcaggttttc
atctaccccgctgcgcactacattatggctcaggacagggttcaaactgctcttgaatct
atacagcaggagctcgaccaaaggctcgcagagtttagagagcagggaaagctccttgaa
gcccagaggctcgaggctcgcacaaaatacgatatggagatgatagccgaggttggtttc
tgcagcggaatcgagaactatgcaaggcatcttgccggcttgcgcccgggggctaagccc
tacaccctgctcgattatttcccgaaggatttcattatgtttattgatgaatcccacgtt
accctcccgcaggttagagcgatgtatgcaggagatagaaacagaaagcaggtgctcgtt
gaccacggcttccgtctgccaagcgcaatggacaacaggcccctgcgttttgatgaattc
gagcagcgtccgggcagaacggtttacgtttccgcaacccccggcgattatgagctcggc
cttaccggcggggaaatcgttgagcagattatccgcccgacaggccttctcgacccgaaa
gttgaggtgcgtcctgcgagcagtcaggtaagcgatgtgaaatctgagatttatgaaaga
gttgaagctgggcagagggttctggttacagttcttacaaaaagactcgctgaagacctt
acagacttcttccagaaggagaaaatcaaatgccgctatctgcacagtgaaatcgatgct
atagaacgtgtggatatcctcagagacctgaggaaaggcgagtttgatgtgctcataggg
atcaacctgcttcgagaagggctcgaccttccggaggtggcaatggtggcaattatggat
gcggacaaggagggtttccttagaagcgaaacttcccttatccagacaatcggcagagca
gcaagaaacgtggattcaagggttatcctctatggtgataaggttacaccatctatgaaa
cgtgctatggatgaaaccgagagaagacgcaagattcagatggagtataacaaaaagcat
aatatcacacctgaaacgatcaggaaatccatcagaacagccctctcggactcactgaaa
gcgagaaaaacggcaagacaggctgtttctatggacgaaaaagagtatgataagaccgag
atggtcgctatgcttgagaaggaaatgatgaaagcggcagaagagctcaatttcgaaaag
gccgccaagctgcgcgacaagataaaggaatttgaatcaatgccgaagatagaaaagaag
aaatag
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