Sedimentisphaera cyanobacteriorum L21-RPul-D3: L21SP3_01211
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Entry
L21SP3_01211 CDS
T04695
Symbol
rpoA_2
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pbu
Sedimentisphaera cyanobacteriorum L21-RPul-D3
Pathway
pbu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pbu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
L21SP3_01211 (rpoA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbu03021
]
L21SP3_01211 (rpoA_2)
03400 DNA repair and recombination proteins [BR:
pbu03400
]
L21SP3_01211 (rpoA_2)
Enzymes [BR:
pbu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
L21SP3_01211 (rpoA_2)
Transcription machinery [BR:
pbu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
L21SP3_01211 (rpoA_2)
DNA repair and recombination proteins [BR:
pbu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
L21SP3_01211 (rpoA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Prophage_tailD1
Motif
Other DBs
NCBI-ProteinID:
AQQ09406
UniProt:
A0A1Q2HQ73
LinkDB
All DBs
Position
complement(1533342..1534337)
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AA seq
331 aa
AA seq
DB search
MRITWRGIELPTKFEIDKEISNKYYGRFVVEPFERGFGTTIGNSLRRVLLSSIEGAAVTR
VKINGVDHEFTTIPGVLEDVTDIIINIKKIVLKLQGSGERKIKLSAKKKGPVTADMIETD
PYVEIVNKDHVIFSLTEDKEVEMEMTVQKGRGYWAVKDRIADMDRFDQEVGNIEVDALFS
PIVRVRYNTEDTRVGQRTNYDKLILEVWTDGTVTPQLAVIEAAKILRKHINPFTHFSIPG
EEVVDGELVVQDTEKRGEDEELNRKLDMPIGDLELSVRAGNCLESIKLQSVRDLVRYNES
DLLKVRSFGKTSLREIKRKLEELGLSLGMDV
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattacatggagaggcatcgaactgcctacaaagttcgaaatcgacaaagaaata
tcgaataagtattatggcaggtttgtcgtagagccgtttgaaagaggcttcggtactaca
atcggaaacagcctgaggcgtgttctgctctcctcaatcgagggagcagcagtaactcgt
gtaaagataaatggtgttgaccatgagtttacaactatcccgggcgttcttgaagatgtt
actgacatcatcatcaacataaagaagattgtactcaagcttcagggcagcggcgagaga
aaaatcaaactctcggcaaagaaaaaaggccctgtaacagcggatatgatcgaaacagac
ccctatgtggaaatagttaataaagaccacgtgattttcagccttaccgaagataaagag
gtcgaaatggagatgacagttcaaaagggcagaggctactgggctgttaaagaccgtatc
gccgacatggacaggttcgatcaggaagtgggaaatatcgaagttgatgccctcttttcc
ccgatagttcgtgtacgttacaacactgaagatacaagggttggccagcgtacaaactat
gataagctcatccttgaagtttggacggatggaacggtaaccccgcagcttgcggttatt
gaggccgccaagatacttcgcaaacatattaatccgttcacccatttcagtattccggga
gaagaggtcgttgacggcgagctcgtagttcaggacactgagaaaagaggagaggatgaa
gagctcaacaggaagcttgatatgccgatcggagatcttgagctgtctgttcgtgcaggc
aattgccttgaatctatcaaactgcagtctgtcagagatttggtaagatataacgaaagc
gaccttctcaaggttcgcagcttcggaaaaacctcgctcagagaaattaagcgtaagctt
gaagagcttggactttcgcttggaatggatgtataa
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