Sedimentisphaera cyanobacteriorum L21-RPul-D3: L21SP3_01278
Help
Entry
L21SP3_01278 CDS
T04695
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pbu
Sedimentisphaera cyanobacteriorum L21-RPul-D3
Pathway
pbu03030
DNA replication
pbu03410
Base excision repair
pbu03420
Nucleotide excision repair
pbu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L21SP3_01278 (polA)
03410 Base excision repair
L21SP3_01278 (polA)
03420 Nucleotide excision repair
L21SP3_01278 (polA)
03440 Homologous recombination
L21SP3_01278 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbu03032
]
L21SP3_01278 (polA)
03400 DNA repair and recombination proteins [BR:
pbu03400
]
L21SP3_01278 (polA)
Enzymes [BR:
pbu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L21SP3_01278 (polA)
DNA replication proteins [BR:
pbu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
L21SP3_01278 (polA)
DNA repair and recombination proteins [BR:
pbu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
L21SP3_01278 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L21SP3_01278 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
DNA_pol_lambd_f
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AQQ09473
UniProt:
A0A1Q2HQF7
LinkDB
All DBs
Position
1596034..1598787
Genome browser
AA seq
917 aa
AA seq
DB search
MPEKFYLIDGHALIYSSYFAPMRTNLSSPSGEPTKASYIFTTTLLGLINRKNPDMLAVAM
DSREKSFRSDIFPEYKAQRPPMPEDMPQQIERIEQILEAMKIPVLRVKKYEADDIIGTLS
EKASKEGLQTYICSGDKDMLQLIEKNVFVYDIKKDSVKDLNWLETEKQLTPEQFLDALAL
MGDTADNIPGVPDVGPKTAEQWIRKYGSLEKLYENAGEIKGKRGNSLRDSKEEAKLSREL
VEIKRDCPVELRKQAFRLSDFDYDRLAEIFYELGFQRLYKTVGLEGKLEEIKTETKTEGK
GKKKQTALFDNESEYESMKDGRQNYRLVGSEEELEELCGKLEKQTIFAIDTETSSIEPMK
AELVGVSISWKQNEAYYIPVKAGGNAKTISTDKLKEKLGGILRNPNIKKAGQNVKYDIEV
LWNSGLSLEGVSFDTMIASYLLNAERSSNSMDAMAKDYLNYECQPISDLIGKGKSQITFD
KVPAEDAADYACEDADITFRLYEYLNQRLNQQPKLMKLFEELEMPLMKVLCRMEIEGVSI
DCSVLEKMSREISSQIETLRDSIFAQTGSVFNIESPKQLSEVLFDKLKLPQIKKRSTDAS
VLEKLADFHPVIEDVQQFRQLVKLKGTYIDKLGAMVNPKTNRLHCSFNQTITATGRLSSS
NPNLQNIPIRTDIGRKIRAAFVPGEKDGVILSADYSQVELRLLAHFSQDSQLLEAFNSDM
DIHSFVASELLGADTENPEPELRAKAKAVNFGIIYGQGPYALSQSLGITQSEAKEFIDSY
FHRYSSIKDFMQSVIDGAKTNGYVSTILGRRRAVPGINSSAKREKSSAERMAFNTTIQGS
AADLIKAAMIEVQNQIDAEKLKAKMIIQIHDELVFECSRDDAEQNAKLISEIMENAIELR
VRLKVDTGWGENWMTGH
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaaaattttatcttatagacggccacgccttaatatattcgagctattttgct
ccgatgcggacaaacctttcaagcccttcaggcgagcccacaaaggcctcatacatattc
acaaccacactgctcgggctgataaaccgcaaaaatccggacatgcttgctgtggcgatg
gacagcagggaaaaatcgttccgatctgatatttttcccgagtataaggcgcagaggcct
ccaatgcctgaagatatgcctcagcagatcgagaggattgagcagatcctcgaggctatg
aagattcctgttttgagagtgaaaaaatatgaagccgatgatattattggaacactttcc
gaaaaggcctcaaaagaggggttacaaacctatatatgctccggcgacaaggatatgctg
cagcttatcgaaaagaacgtgttcgtttacgacataaaaaaagattccgtgaaagatttg
aactggctggagacagaaaaacagctcaccccggagcagtttcttgatgcacttgctctt
atgggagatactgcagacaatatcccgggtgtcccggatgttgggccgaaaactgctgag
cagtggatcaggaaatacggctctctcgaaaagctctatgaaaatgccggcgagatcaaa
ggcaagagaggcaattcactcagagacagcaaagaagaggccaagctcagcagagagctt
gtggagataaaacgggactgtcctgttgagctgagaaagcaggcattccggctttcggat
tttgactacgacaggcttgcagaaatcttctacgaactgggctttcagagattgtataag
acagtgggacttgagggtaaactcgaagagatcaaaacagaaacaaaaacagaaggcaag
ggaaagaaaaagcagaccgccctgtttgacaatgaatcagaatatgaaagtatgaaagac
ggcaggcaaaactacaggcttgtggggagcgaagaagagcttgaagagctttgcgggaag
cttgagaaacaaacgattttcgcaatcgacaccgaaacatccagcattgagcctatgaag
gccgaactggttggtgtaagcatttcatggaagcagaacgaagcctattatatacccgta
aaggctggcggaaacgcaaagaccatcagcaccgataagctcaaagaaaagctcgggggc
atcctcagaaatccaaatataaagaaggccgggcaaaacgtaaagtacgatatcgaggtg
ctctggaattcagggctgagccttgaaggcgtgagctttgatacgatgattgcttcgtat
ctgctaaatgccgagagaagcagcaactcaatggatgctatggccaaggactatctcaac
tatgaatgccagccgataagcgatttgataggcaagggcaaatcgcagataacattcgat
aaggttcccgccgaggatgcggcagattatgcctgcgaggatgcagatatcacattcagg
ctgtatgagtatctcaatcagagactgaaccagcagccaaagcttatgaagctttttgaa
gagctcgagatgcctctaatgaaggtgctttgcaggatggagattgaaggcgtgagcata
gactgttcggtgcttgagaagatgagcagggaaatctcttctcagatagaaacgttaaga
gattcaatctttgcgcaaaccggctcggttttcaatatagaatctcccaagcagctttct
gaggtgctgtttgacaagctcaagctccctcagataaagaaacggagcaccgatgcatct
gttctggaaaagctcgcagatttccatccggtgatcgaggatgtgcagcagttccgccag
ctcgtaaagctcaaaggcacatacattgacaagctcggggctatggttaacccgaaaaca
aaccgcctgcattgcagcttcaaccagacaataaccgccacaggaaggctgagttcatcc
aatccgaacttgcagaatatcccgatacgtacagatataggacggaagattcgcgctgcg
tttgtgccgggggagaaagacggcgtaatattgagcgccgactactcacaggtggagctc
aggctcctcgcccatttctctcaggacagccagcttctggaagcattcaacagcgatatg
gatatacacagcttcgtggcaagtgaacttctcggggcagatactgagaacccagagccc
gagctgagagccaaggcaaaggctgtgaatttcggcattatttacggccaagggccttat
gccctttcgcagtctctggggataacacaaagcgaggcgaaggaatttatcgacagctac
tttcatcggtacagctcgataaaggattttatgcagagcgtaatcgacggggcaaaaacc
aacggttatgtaagcacaatactcggaagacgcagagctgtgcccgggataaactcctca
gcaaaacgcgagaaatcttctgccgagcggatggccttcaataccacaatacaaggctcg
gctgcggatttgattaaggctgctatgattgaggtgcagaatcaaattgacgcagaaaaa
ctcaaagctaagatgattatccagattcacgatgagctggttttcgaatgcagcagagac
gatgctgagcaaaacgcaaagctcatcagcgagataatggaaaacgcaatagagctcagg
gttagactgaaggtggacaccggctggggcgaaaactggatgaccgggcattga
DBGET
integrated database retrieval system
