Sedimentisphaera cyanobacteriorum L21-RPul-D3: L21SP3_01370
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Entry
L21SP3_01370 CDS
T04695
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pbu
Sedimentisphaera cyanobacteriorum L21-RPul-D3
Brite
KEGG Orthology (KO) [BR:
pbu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbu03016
]
L21SP3_01370 (rnd)
Enzymes [BR:
pbu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
L21SP3_01370 (rnd)
Transfer RNA biogenesis [BR:
pbu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
L21SP3_01370 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
DUF6364
Motif
Other DBs
NCBI-ProteinID:
AQQ09564
UniProt:
A0A1Q2HQL1
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All DBs
Position
1708986..1710128
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AA seq
380 aa
AA seq
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MNTISYKYIDTQIQLDKLEKGIAESSFAALDIEGNSMHSYYERVCLMQISIENGSFIVDT
LKDIDFSGFTKTLEQKLLILHGGDYDLRMLDKDFGFKPKFKIFDTQQAASLAGIQKTSLS
ELLKEFLGLSHPKDQQLSDWTKRPLTEKQLSYAAADTAYLKPLADKLTELLDSMGRSEWV
SQSMKDRAKNTPKYKVKSSREKWRVKGYSALEPAGLRFLREIWELREDIAAKIDLPPFKV
MRSSSMIELSKKLAEKPSYSLAKSKFLPKTCKGEFYGVLKKRIEHARKLPESRWPERFVK
RGKPPSHDKALTKKLRSFVLQAAEERGIDPSILVNKAGIEEISRRKPQTEAELREVLQLN
DWQFDILEAKFISIIQSHTS
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaacacaatttcttataaatacatagacacgcaaatccagcttgacaaacttgaaaag
ggtattgccgaatcaagcttcgcagctttagatatagaaggaaattcgatgcactcttac
tatgaaagggtgtgtcttatgcagataagtatagaaaacggcagctttattgttgacacg
ttaaaggatattgatttttccggctttactaaaacactcgaacaaaagcttttaatcctt
cacggcggcgactacgacctgcgtatgcttgataaagattttggattcaagccgaagttt
aaaatttttgatactcagcaggccgcctccctagcaggaatccaaaagacaagcctttcg
gagctgctcaaagagtttctcggattatcacatcccaaagaccagcagctttcggactgg
acaaaaagaccgctcacagaaaaacagctttcctatgcagctgcagatacggcctacctc
aaaccgcttgccgataagctcacagagcttcttgatagtatgggaagaagcgaatgggtg
agccagtctatgaaagacagggcaaaaaatacgccgaaatacaaagttaaaagctcccgc
gaaaagtggagggtaaaagggtactccgctctcgaaccggcggggctgagatttctaagg
gaaatatgggaattgcgcgaagatattgccgctaaaatagacctgcctccgttcaaggta
atgagaagctcatcgatgattgagctgtctaaaaaacttgccgagaagccttcttacagc
cttgcaaaaagcaaattcctgccgaaaacatgcaaaggcgagttttacggtgtgctgaag
aagcgaatagaacacgcaagaaagcttcccgaaagcagatggccggagaggtttgtaaaa
agaggaaaaccgccttcacacgacaaggctctcacaaaaaaactaaggtcttttgttctt
caggctgcggaagaaagaggcatagacccgtccattctggtaaacaaggcaggtattgag
gaaatttcccgaagaaaacctcagaccgaagccgagcttagagaagtgctgcagctgaac
gactggcagtttgatattttagaagcgaaatttataagcattatccagagccacacaagc
tga
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