Sedimentisphaera cyanobacteriorum L21-RPul-D3: L21SP3_02213
Help
Entry
L21SP3_02213 CDS
T04695
Symbol
miaB_2
Name
(GenBank) (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
pbu
Sedimentisphaera cyanobacteriorum L21-RPul-D3
Brite
KEGG Orthology (KO) [BR:
pbu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbu03016
]
L21SP3_02213 (miaB_2)
Enzymes [BR:
pbu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
L21SP3_02213 (miaB_2)
Transfer RNA biogenesis [BR:
pbu03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
L21SP3_02213 (miaB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Motif
Other DBs
NCBI-ProteinID:
AQQ10381
UniProt:
A0A1Q2HSS5
LinkDB
All DBs
Position
complement(2799991..2801394)
Genome browser
AA seq
467 aa
AA seq
DB search
MNKNKLYIVSFGCQMNKLDTSLVEAEFTKEGFELTNNQNEADVILMNTCSVREHAEQRVL
SRLGYAKHLKRSGRKVVVGVIGCMAQRLGSSLLERDEVDIVCGPGQIPELKAMVLKKLED
RKGGILNVSAHIRKSPSPQNSNMLDEFELENSPNLTEHKNKAFVRVMRGCNNFCSYCIVP
FVRGPEISRSPEKILQQIRRLADSGVRQITLLGQTVNSYRHKENGTEYRLHNLLEKTAEI
DGIEWISFVTNYPYMDYTAPLFKAVADIDKVCPYLHLPAQSGSERILKAMNRKYSAEDYI
RLIDEAREYVPDIAVAGDFIVGFPGETDEDFRDTEKLVERIRYKNIFAFKYSPRPGTSTE
KRLEDNVPDKVKRERNIKLLALQESISSEDNKKFEGEVFRVFVEGKSSKGHLNSAENQIH
PQLIGRTAGDYIVVFNGPEELAGKFADVSIEKTSALTLFGTLLERRS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaataaactttacatagtcagcttcggctgccagatgaacaaactggacaca
agccttgtagaagcggaattcacgaaagagggattcgagctaactaataaccaaaatgag
gcggacgtaatacttatgaacacctgttcggtgcgagagcatgccgaacagcgggttctc
tcccgcctcggatatgcaaaacacctcaaacgcagcggtcgcaaggttgttgtgggtgta
atcgggtgcatggctcagagactcggcagctcccttctcgagagggacgaagtggatatt
gtttgcgggcccgggcagattccggagctcaaagcgatggtgctgaaaaagctggaagac
cgaaaaggcgggattcttaacgtttcggctcatatcagaaaatcaccctctcctcaaaac
tcaaatatgcttgatgagtttgagcttgagaactcgccaaacctgactgaacacaaaaac
aaggcgtttgtgcgggtaatgaggggctgcaacaacttctgcagctactgcatcgtgcct
tttgtacgcgggccggaaatatccagaagccccgagaaaatcctccagcagatacgcagg
ctcgcagattcgggcgtcaggcagattaccctgctcgggcagaccgtaaactcctacagg
cataaagaaaacgggaccgaataccgcctgcataatctgcttgagaaaaccgccgagatc
gacgggattgaatggatcagctttgttaccaactatccgtatatggattataccgccccg
cttttcaaggcggtcgcagatatcgacaaggtttgcccgtatctgcatctgcccgcccag
agcgggtctgagcgtatcctgaaggctatgaatcgaaaatactctgcggaagattacatc
cgcctgatagatgaggcccgagaatacgttccggatattgctgttgcgggggattttatc
gtgggcttccccggggaaaccgatgaggatttccgcgatacagagaagctcgttgagcgg
atccgatacaagaacatcttcgcgttcaaatattcaccgcggcccgggacaagcaccgag
aagcgtcttgaggataacgtgcccgacaaggtaaagcgggagaggaatattaaactgctc
gcccttcaggaatctatcagcagcgaggacaacaaaaaattcgagggcgaagtatttcgg
gtattcgtggaaggaaagagcagcaaaggccatctcaacagcgcagaaaatcaaatccac
ccccagcttatcggaagaactgccggggattatatagttgtgtttaacggcccagaagag
cttgcaggaaaatttgcagacgttagtatagagaaaacctccgcactcacgcttttcgga
acgctcttagagagacgaagctaa
DBGET
integrated database retrieval system
