Pseudomonas bubulae: V6B39_00205
Help
Entry
V6B39_00205 CDS
T10711
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pbub Pseudomonas bubulae
Brite
KEGG Orthology (KO) [BR:
pbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbub03016
]
V6B39_00205 (truB)
Enzymes [BR:
pbub01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
V6B39_00205 (truB)
Transfer RNA biogenesis [BR:
pbub03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
V6B39_00205 (truB)
Prokaryotic type
V6B39_00205 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
WWR37898
LinkDB
All DBs
Position
complement(51399..52316)
Genome browser
AA seq
305 aa
AA seq
DB search
MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLASGVLPLCFG
EATKFSQYLLDSDKGYETLMQLGKTTTTADAEGEVLQTRPVTVGRADIEAVLPNFRGQIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTITRLELLASEGDTARLAVDCTKGTYI
RTLVEDIGEQLGCGAYVAELRRTHAGPFSLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLLDWPLLHFSEASSFYWLNGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaagcgtatccgtcgtaacgtcagcggcatcatcctgctggacaagcca
cttgggtttacttccaatgcggccctgcagaaagttcgctggctgctcaatgccgagaag
gcagggcacaccggtagcctcgatccattggccagcggtgtattgccgctgtgctttggc
gaagccaccaagttttcgcaatacctgctcgattccgacaagggttatgaaaccctgatg
caattgggcaagaccacgaccacggcagacgctgaaggcgaggttttgcagactcgcccg
gtgaccgttggtcgcgccgatattgaagctgttttacccaattttcgtgggcaaatcagc
cagataccgccgatgtactctgcgctcaagcgtgacggacagccgctttacaagctggcc
cgtgcaggcgaagtggtggagcgtgaaccgcgttctgttactattacccgcctcgaatta
ctggccagcgaaggcgacactgcgcgcctggccgtcgactgcaccaaaggcacctatatc
cgtacccttgtggaagatatcggtgagcaattggggtgcggggcatacgttgcagaactg
cgtcgtacccacgccggacctttcagcctggcccagacggttaccctggaagagctggag
gcggtgcatgccgaaggcggcaatgaagcggttgatcgcttcctgatgccatcggacagc
ggtttgctcgactggccattgctgcacttctcggaagccagctcgttttattggctcaat
ggccaaccggtgcgtgctccggatgctccgaagttcggtatggtgcgggtacaggatcac
aacggtcgctttatcggtatcggtgaagtgagcgaagacgggcgtattgcgccgcgtcga
ctgattcggtcggaatga
DBGET
integrated database retrieval system
